Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 FKBP4-201ENST00000001008 3732 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.494e-8■□□□□ 9
LARP4Q71RC2 COPB1-208ENST00000532088 510 ntTSL 311.85□□□□□ -0.514e-8■□□□□ 9
LARP4Q71RC2 PANK2-206ENST00000497424 4815 ntTSL 2 BASIC11.61□□□□□ -0.557e-6■□□□□ 9
LARP4Q71RC2 ERGIC3-215ENST00000486268 584 ntTSL 211.56□□□□□ -0.562e-9■□□□□ 9
LARP4Q71RC2 USP10-219ENST00000570191 2717 ntTSL 2 BASIC11.42□□□□□ -0.582e-7■□□□□ 9
LARP4Q71RC2 ECH1-210ENST00000598316 553 ntTSL 211.21□□□□□ -0.617e-6■□□□□ 9
LARP4Q71RC2 UBL7-205ENST00000565130 792 ntTSL 311.09□□□□□ -0.637e-6■□□□□ 9
LARP4Q71RC2 AP2M1-205ENST00000431779 602 ntTSL 310.99□□□□□ -0.652e-7■□□□□ 9
LARP4Q71RC2 ERGIC3-207ENST00000438317 590 ntTSL 310.95□□□□□ -0.662e-9■□□□□ 9
LARP4Q71RC2 USP10-207ENST00000563048 1315 ntTSL 210.82□□□□□ -0.682e-7■□□□□ 9
LARP4Q71RC2 DCTN2-212ENST00000549394 1439 ntTSL 210.8□□□□□ -0.687e-6■□□□□ 9
LARP4Q71RC2 AP2M1-206ENST00000432591 802 ntTSL 510.51□□□□□ -0.732e-7■□□□□ 9
LARP4Q71RC2 SYNJ2BP-COX16-203ENST00000617196 580 ntAPPRIS ALT2 TSL 210.48□□□□□ -0.737e-6■□□□□ 9
LARP4Q71RC2 ERH-202ENST00000555373 586 ntTSL 2 BASIC10.34□□□□□ -0.752e-7■□□□□ 9
LARP4Q71RC2 ENY2-204ENST00000517756 445 ntTSL 510.29□□□□□ -0.764e-15■□□□□ 9
LARP4Q71RC2 TPD52L2-208ENST00000474176 4053 ntTSL 210.22□□□□□ -0.772e-7■□□□□ 9
LARP4Q71RC2 ECH1-214ENST00000601094 440 ntTSL 210.2□□□□□ -0.787e-6■□□□□ 9
LARP4Q71RC2 AP2M1-222ENST00000621863 1305 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.782e-7■□□□□ 9
LARP4Q71RC2 COPB1-201ENST00000249923 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.794e-8■□□□□ 9
LARP4Q71RC2 SNF8-214ENST00000515174 823 ntTSL 210.05□□□□□ -0.87e-6■□□□□ 9
LARP4Q71RC2 EIF2AK1-202ENST00000422786 782 ntTSL 310.02□□□□□ -0.817e-6■□□□□ 9
LARP4Q71RC2 ENY2-210ENST00000521662 562 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.824e-15■□□□□ 9
LARP4Q71RC2 ENY2-214ENST00000522766 567 ntTSL 49.96□□□□□ -0.824e-15■□□□□ 9
LARP4Q71RC2 ERGIC3-201ENST00000279052 2846 ntTSL 29.93□□□□□ -0.822e-9■□□□□ 9
LARP4Q71RC2 NDUFA9-206ENST00000540688 642 ntTSL 2 BASIC9.88□□□□□ -0.837e-6■□□□□ 9
LARP4Q71RC2 ENY2-202ENST00000517311 2966 ntTSL 29.75□□□□□ -0.854e-15■□□□□ 9
LARP4Q71RC2 LSM4-205ENST00000597776 446 ntTSL 29.54□□□□□ -0.887e-6■□□□□ 9
LARP4Q71RC2 SLC2A8-211ENST00000484208 402 ntTSL 39.21□□□□□ -0.947e-6■□□□□ 9
LARP4Q71RC2 USP10-215ENST00000569038 730 ntTSL 39.05□□□□□ -0.962e-7■□□□□ 9
LARP4Q71RC2 COPB1-202ENST00000439561 3382 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.974e-8■□□□□ 9
LARP4Q71RC2 ECH1-205ENST00000595567 308 ntTSL 38.94□□□□□ -0.987e-6■□□□□ 9
LARP4Q71RC2 ENY2-208ENST00000520147 857 ntTSL 4 BASIC8.93□□□□□ -0.984e-15■□□□□ 9
LARP4Q71RC2 ENY2-211ENST00000521688 2922 ntTSL 1 (best) BASIC8.86□□□□□ -0.994e-15■□□□□ 9
LARP4Q71RC2 HSD17B4-221ENST00000515235 5540 ntTSL 28.86□□□□□ -0.997e-6■□□□□ 9
LARP4Q71RC2 TCP1-218ENST00000546204 566 ntTSL 28.85□□□□□ -0.992e-7■□□□□ 9
LARP4Q71RC2 SNF8-211ENST00000512243 863 ntTSL 28.84□□□□□ -0.997e-6■□□□□ 9
LARP4Q71RC2 COX16-203ENST00000555601 384 ntTSL 38.78□□□□□ -17e-6■□□□□ 9
LARP4Q71RC2 DCTN2-202ENST00000543672 1321 ntAPPRIS ALT1 TSL 5 BASIC8.77□□□□□ -1.017e-6■□□□□ 9
LARP4Q71RC2 AC005833.3-201ENST00000543979 864 ntTSL 28.72□□□□□ -1.017e-6■□□□□ 9
LARP4Q71RC2 C14orf166-206ENST00000556760 851 ntTSL 5 BASIC8.57□□□□□ -1.044e-8■□□□□ 9
LARP4Q71RC2 ERGIC3-204ENST00000411577 601 ntTSL 28.48□□□□□ -1.052e-9■□□□□ 9
LARP4Q71RC2 ENY2-201ENST00000339942 546 ntTSL 48.4□□□□□ -1.064e-15■□□□□ 9
LARP4Q71RC2 HSD17B4-220ENST00000513628 2225 ntTSL 2 BASIC8.37□□□□□ -1.077e-6■□□□□ 9
LARP4Q71RC2 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.17e-6■□□□□ 9
LARP4Q71RC2 LAP3-202ENST00000503467 1709 ntTSL 28.12□□□□□ -1.117e-6■□□□□ 9
LARP4Q71RC2 COPB1-203ENST00000525214 566 ntTSL 27.79□□□□□ -1.164e-8■□□□□ 9
LARP4Q71RC2 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.174e-8■□□□□ 9
LARP4Q71RC2 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC7.52□□□□□ -1.217e-6■□□□□ 9
LARP4Q71RC2 ECH1-209ENST00000597805 135 ntTSL 57.4□□□□□ -1.227e-6■□□□□ 9
LARP4Q71RC2 C14orf166-203ENST00000553479 562 ntTSL 27.31□□□□□ -1.244e-8■□□□□ 9
LARP4Q71RC2 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.254e-8■□□□□ 9
LARP4Q71RC2 CAPNS1-203ENST00000586963 570 ntTSL 27.26□□□□□ -1.257e-6■□□□□ 9
LARP4Q71RC2 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.341e-6■□□□□ 9
LARP4Q71RC2 HSD17B4-213ENST00000509606 844 ntTSL 26.71□□□□□ -1.347e-6■□□□□ 9
LARP4Q71RC2 FADS2-206ENST00000518606 510 ntTSL 46.68□□□□□ -1.347e-6■□□□□ 9
LARP4Q71RC2 ENY2-216ENST00000523707 737 ntTSL 56.66□□□□□ -1.344e-15■□□□□ 9
LARP4Q71RC2 C8orf59-205ENST00000523281 756 ntTSL 56.63□□□□□ -1.357e-6■□□□□ 9
LARP4Q71RC2 C8orf59-204ENST00000523245 799 ntTSL 26.44□□□□□ -1.387e-6■□□□□ 9
LARP4Q71RC2 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.387e-6■□□□□ 9
LARP4Q71RC2 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.412e-7■□□□□ 9
LARP4Q71RC2 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.08□□□□□ -1.447e-6■□□□□ 9
LARP4Q71RC2 HSD17B4-205ENST00000503310 1129 ntTSL 26.04□□□□□ -1.447e-6■□□□□ 9
LARP4Q71RC2 C14orf166-202ENST00000553362 683 ntTSL 26□□□□□ -1.454e-8■□□□□ 9
LARP4Q71RC2 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.472e-7■□□□□ 9
LARP4Q71RC2 HSD17B4-214ENST00000509951 736 ntTSL 55.82□□□□□ -1.487e-6■□□□□ 9
LARP4Q71RC2 DCTN2-205ENST00000546758 817 ntTSL 55.49□□□□□ -1.537e-6■□□□□ 9
LARP4Q71RC2 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC5.29□□□□□ -1.567e-6■□□□□ 9
LARP4Q71RC2 ENY2-209ENST00000521619 1384 ntTSL 1 (best)5.28□□□□□ -1.564e-15■□□□□ 9
LARP4Q71RC2 ECH1-208ENST00000597205 169 ntTSL 55.25□□□□□ -1.577e-6■□□□□ 9
LARP4Q71RC2 ABCD3-203ENST00000464165 3174 ntTSL 25.24□□□□□ -1.574e-8■□□□□ 9
LARP4Q71RC2 USP10-218ENST00000570053 502 ntTSL 35.17□□□□□ -1.582e-7■□□□□ 9
LARP4Q71RC2 SYNJ2BP-COX16-202ENST00000617124 479 ntAPPRIS ALT2 TSL 25.11□□□□□ -1.597e-6■□□□□ 9
LARP4Q71RC2 FKBP4-207ENST00000544366 287 ntTSL 34.64□□□□□ -1.674e-8■□□□□ 9
LARP4Q71RC2 ABCD3-205ENST00000484213 4367 ntTSL 1 (best)3.96□□□□□ -1.774e-8■□□□□ 9
LARP4Q71RC2 SYNJ2BP-COX16-201ENST00000555276 318 ntTSL 23.41□□□□□ -1.867e-6■□□□□ 9
LARP4Q71RC2 ENY2-205ENST00000518118 2747 ntTSL 1 (best)2.57□□□□□ -24e-15■□□□□ 9
LARP4Q71RC2 ERH-204ENST00000557697 167 ntTSL 50.14□□□□□ -2.392e-7■□□□□ 9
LARP4Q71RC2 SURF4-205ENST00000467910 693 ntTSL 511.96□□□□□ -0.491e-20■□□□□ 9
LARP4Q71RC2 BMP4-207ENST00000559501 1112 ntTSL 210.23□□□□□ -0.776e-11■□□□□ 9
LARP4Q71RC2 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.647e-7■□□□□ 9
LARP4Q71RC2 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.48■□□□□ 0.077e-7■□□□□ 9
LARP4Q71RC2 TKFC-206ENST00000525366 916 ntTSL 217.21■□□□□ 0.356e-8■□□□□ 9
LARP4Q71RC2 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.286e-8■□□□□ 9
LARP4Q71RC2 TKFC-219ENST00000534084 964 ntTSL 312.27□□□□□ -0.456e-8■□□□□ 9
LARP4Q71RC2 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.237e-9■□□□□ 9
LARP4Q71RC2 ILF3-221ENST00000591649 2579 ntTSL 214.15□□□□□ -0.147e-9■□□□□ 9
LARP4Q71RC2 ILF3-219ENST00000590261 3219 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.457e-9■□□□□ 9
LARP4Q71RC2 ILF3-208ENST00000587928 4230 ntTSL 210.86□□□□□ -0.677e-9■□□□□ 9
LARP4Q71RC2 ILF3-205ENST00000586544 3859 ntTSL 1 (best)10.01□□□□□ -0.817e-9■□□□□ 9
LARP4Q71RC2 SCARB1-205ENST00000538291 5527 ntTSL 516.06■□□□□ 0.161e-12■□□□□ 9
LARP4Q71RC2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.921e-20■□□□□ 9
LARP4Q71RC2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.574e-6■□□□□ 9
LARP4Q71RC2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.71■□□□□ 0.431e-20■□□□□ 9
LARP4Q71RC2 RHOC-210ENST00000425265 866 ntTSL 317.18■□□□□ 0.344e-6■□□□□ 9
LARP4Q71RC2 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.04■□□□□ 0.164e-6■□□□□ 9
LARP4Q71RC2 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.59□□□□□ -0.071e-20■□□□□ 9
LARP4Q71RC2 RHOC-219ENST00000534717 574 ntTSL 313.33□□□□□ -0.284e-6■□□□□ 9
LARP4Q71RC2 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC12.8□□□□□ -0.361e-20■□□□□ 9
LARP4Q71RC2 AK2-207ENST00000482191 599 ntTSL 212.64□□□□□ -0.394e-6■□□□□ 9
LARP4Q71RC2 C4BPB-204ENST00000391923 949 ntAPPRIS P3 TSL 5 BASIC9.94□□□□□ -0.822e-9■□□□□ 9
Retrieved 100 of 15,922 protein–RNA pairs in 340.3 ms