RNA–Protein interactions for RNA: ENST00000617124.4

SYNJ2BP-COX16-202, Transcript of SYNJ2BP-COX16 readthrough, humanhuman

APPRIS ALT2 TSL 2

Gene SYNJ2BP-COX16, Length 479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNJ2BP-COX16-202ENST00000617124 AEBP2Q6ZN18 517 aaPredicted RBP17.41■□□□□ 0.38
SYNJ2BP-COX16-202ENST00000617124 CHIC1Q5VXU3 224 aa16.57■□□□□ 0.24
SYNJ2BP-COX16-202ENST00000617124 SENP3Q9H4L4 574 aaPredicted RBP15.02■□□□□ -0
SYNJ2BP-COX16-202ENST00000617124 NISCHQ9Y2I1 1504 aa14.88□□□□□ -0.03
SYNJ2BP-COX16-202ENST00000617124 PHF23Q9BUL5 403 aaPredicted RBP14.79□□□□□ -0.04
SYNJ2BP-COX16-202ENST00000617124 FOXD1Q16676 465 aa13.92□□□□□ -0.18
SYNJ2BP-COX16-202ENST00000617124 ABCC9O60706 1549 aa13.74□□□□□ -0.21
SYNJ2BP-COX16-202ENST00000617124 CCDC180Q9P1Z9 1646 aa13.53□□□□□ -0.24
SYNJ2BP-COX16-202ENST00000617124 PLPPR3Q6T4P5 718 aa13.31□□□□□ -0.28
SYNJ2BP-COX16-202ENST00000617124 MSH5O43196 834 aa13.15□□□□□ -0.3
SYNJ2BP-COX16-202ENST00000617124 DNAJC5BQ9UF47 199 aa13.14□□□□□ -0.31
SYNJ2BP-COX16-202ENST00000617124 PIAS4Q8N2W9 510 aaPredicted RBP13.1□□□□□ -0.31
SYNJ2BP-COX16-202ENST00000617124 RB1CC1Q8TDY2 1594 aa13.01□□□□□ -0.33
SYNJ2BP-COX16-202ENST00000617124 ADRA2BP18089 450 aa12.98□□□□□ -0.33
SYNJ2BP-COX16-202ENST00000617124 PPP6R1Q9UPN7 881 aa12.95□□□□□ -0.34
SYNJ2BP-COX16-202ENST00000617124 NACADO15069 1562 aa12.85□□□□□ -0.35
SYNJ2BP-COX16-202ENST00000617124 POTEDQ86YR6 584 aa12.82□□□□□ -0.36
SYNJ2BP-COX16-202ENST00000617124 PABPN1Q86U42 306 aaKnown RBP eCLIP12.73□□□□□ -0.37
SYNJ2BP-COX16-202ENST00000617124 UNC13AQ9UPW8 1703 aa12.71□□□□□ -0.38
SYNJ2BP-COX16-202ENST00000617124 DCAF8L2P0C7V8 631 aa12.63□□□□□ -0.39
SYNJ2BP-COX16-202ENST00000617124 BICRAQ9NZM4 1560 aa12.62□□□□□ -0.39
SYNJ2BP-COX16-202ENST00000617124 MYO15BQ96JP2 1530 aa12.59□□□□□ -0.39
SYNJ2BP-COX16-202ENST00000617124 SHROOM4Q9ULL8 1493 aa12.48□□□□□ -0.41
SYNJ2BP-COX16-202ENST00000617124 CECR2Q9BXF3 1484 aa12.45□□□□□ -0.42
SYNJ2BP-COX16-202ENST00000617124 CC2D2AQ9P2K1 1620 aa12.44□□□□□ -0.42
SYNJ2BP-COX16-202ENST00000617124 DNAJC5Q9H3Z4 198 aa12.35□□□□□ -0.43
SYNJ2BP-COX16-202ENST00000617124 EIF4G1Q04637 1599 aaKnown RBP12.35□□□□□ -0.43
SYNJ2BP-COX16-202ENST00000617124 DCAF1Q9Y4B6 1507 aa12.32□□□□□ -0.44
SYNJ2BP-COX16-202ENST00000617124 ZCCHC6Q5VYS8 1495 aaKnown RBP12.27□□□□□ -0.45
SYNJ2BP-COX16-202ENST00000617124 SCRIBQ14160 1630 aa12.24□□□□□ -0.45
SYNJ2BP-COX16-202ENST00000617124 CUX2O14529 1486 aa12.04□□□□□ -0.48
SYNJ2BP-COX16-202ENST00000617124 SCAF1Q9H7N4 1312 aaKnown RBP12.03□□□□□ -0.48
SYNJ2BP-COX16-202ENST00000617124 ERCC6Q03468 1493 aa11.93□□□□□ -0.5
SYNJ2BP-COX16-202ENST00000617124 MAPK8IP2Q13387 824 aaPredicted RBP11.91□□□□□ -0.5
SYNJ2BP-COX16-202ENST00000617124 NCAPD3P42695 1498 aa11.86□□□□□ -0.51
SYNJ2BP-COX16-202ENST00000617124 DMRT2Q9Y5R5 561 aa11.84□□□□□ -0.51
SYNJ2BP-COX16-202ENST00000617124 ATAD2BQ9ULI0 1458 aa11.76□□□□□ -0.53
SYNJ2BP-COX16-202ENST00000617124 HMGXB3Q12766 1538 aa11.76□□□□□ -0.53
SYNJ2BP-COX16-202ENST00000617124 SMARCA2P51531 1590 aa11.74□□□□□ -0.53
SYNJ2BP-COX16-202ENST00000617124 NESP48681 1621 aa11.72□□□□□ -0.53
SYNJ2BP-COX16-202ENST00000617124 THOC2Q8NI27 1593 aaKnown RBP11.71□□□□□ -0.54
SYNJ2BP-COX16-202ENST00000617124 SMARCA4P51532 1647 aa11.68□□□□□ -0.54
SYNJ2BP-COX16-202ENST00000617124 LAMC3Q9Y6N6 1575 aa11.66□□□□□ -0.54
SYNJ2BP-COX16-202ENST00000617124 TRIM41Q8WV44 630 aa11.64□□□□□ -0.55
SYNJ2BP-COX16-202ENST00000617124 BAZ1BQ9UIG0 1483 aaKnown RBP11.63□□□□□ -0.55
SYNJ2BP-COX16-202ENST00000617124 PPP4R3CPQ6ZMV5 832 aa11.63□□□□□ -0.55
SYNJ2BP-COX16-202ENST00000617124 KIF21AQ7Z4S6 1674 aa11.6□□□□□ -0.55
SYNJ2BP-COX16-202ENST00000617124 PEG3Q9GZU2 1588 aa11.59□□□□□ -0.55
SYNJ2BP-COX16-202ENST00000617124 PDS5BQ9NTI5 1447 aa11.59□□□□□ -0.55
SYNJ2BP-COX16-202ENST00000617124 BAZ1AQ9NRL2 1556 aaPredicted RBP11.58□□□□□ -0.55
SYNJ2BP-COX16-202ENST00000617124 DCAF8L1A6NGE4 600 aa11.57□□□□□ -0.56
SYNJ2BP-COX16-202ENST00000617124 MRC2Q9UBG0 1479 aa11.49□□□□□ -0.57
SYNJ2BP-COX16-202ENST00000617124 WDR62O43379 1518 aa11.48□□□□□ -0.57
SYNJ2BP-COX16-202ENST00000617124 CADPSQ9ULU8 1353 aa11.47□□□□□ -0.57
SYNJ2BP-COX16-202ENST00000617124 CNKSR2Q8WXI2 1034 aa11.45□□□□□ -0.58
SYNJ2BP-COX16-202ENST00000617124 MROH2BQ7Z745 1585 aa11.43□□□□□ -0.58
SYNJ2BP-COX16-202ENST00000617124 OSCARQ8IYS5 282 aa11.41□□□□□ -0.58
SYNJ2BP-COX16-202ENST00000617124 CEP164Q9UPV0 1460 aa11.38□□□□□ -0.59
SYNJ2BP-COX16-202ENST00000617124 HOXD11P31277 338 aaPredicted RBP11.36□□□□□ -0.59
SYNJ2BP-COX16-202ENST00000617124 CACNB1Q02641 598 aaPredicted RBP11.36□□□□□ -0.59
SYNJ2BP-COX16-202ENST00000617124 FANCD2Q9BXW9 1451 aa11.33□□□□□ -0.6
SYNJ2BP-COX16-202ENST00000617124 RNF216Q9NWF9 866 aaPredicted RBP11.32□□□□□ -0.6
SYNJ2BP-COX16-202ENST00000617124 RIMBP3CA6NJZ7 1639 aa11.29□□□□□ -0.6
SYNJ2BP-COX16-202ENST00000617124 RIMBP3BA6NNM3 1639 aa11.29□□□□□ -0.6
SYNJ2BP-COX16-202ENST00000617124 RIMBP3Q9UFD9 1639 aa11.29□□□□□ -0.6
SYNJ2BP-COX16-202ENST00000617124 NCBP3Q53F19 620 aaKnown RBP11.29□□□□□ -0.6
SYNJ2BP-COX16-202ENST00000617124 WIZO95785 1651 aa11.29□□□□□ -0.6
SYNJ2BP-COX16-202ENST00000617124 CFTRP13569 1480 aa11.28□□□□□ -0.6
SYNJ2BP-COX16-202ENST00000617124 URB2Q14146 1524 aaKnown RBP11.25□□□□□ -0.61
SYNJ2BP-COX16-202ENST00000617124 ARHGEF11O15085 1522 aa11.23□□□□□ -0.61
SYNJ2BP-COX16-202ENST00000617124 PRDM2Q13029 1718 aa11.18□□□□□ -0.62
SYNJ2BP-COX16-202ENST00000617124 IFT140Q96RY7 1462 aa11.17□□□□□ -0.62
SYNJ2BP-COX16-202ENST00000617124 ZNF608Q9ULD9 1512 aaPredicted RBP11.14□□□□□ -0.63
SYNJ2BP-COX16-202ENST00000617124 CYB5RLQ6IPT4 315 aa11.14□□□□□ -0.63
SYNJ2BP-COX16-202ENST00000617124 TOP2AP11388 1531 aaKnown RBP11.14□□□□□ -0.63
SYNJ2BP-COX16-202ENST00000617124 TRHP20396 242 aaPredicted RBP11.13□□□□□ -0.63
SYNJ2BP-COX16-202ENST00000617124 RNF39Q9H2S5 420 aa11.13□□□□□ -0.63
SYNJ2BP-COX16-202ENST00000617124 EIF4G3O43432 1585 aaKnown RBP11.1□□□□□ -0.63
SYNJ2BP-COX16-202ENST00000617124 RSF1Q96T23 1441 aaPredicted RBP11.09□□□□□ -0.63
SYNJ2BP-COX16-202ENST00000617124 ABCC8Q09428 1581 aa11.08□□□□□ -0.64
SYNJ2BP-COX16-202ENST00000617124 ARAP1Q96P48 1450 aa11.08□□□□□ -0.64
SYNJ2BP-COX16-202ENST00000617124 CHD1O14646 1710 aa11.08□□□□□ -0.64
SYNJ2BP-COX16-202ENST00000617124 TOPBP1Q92547 1522 aa11.08□□□□□ -0.64
SYNJ2BP-COX16-202ENST00000617124 DNMBPQ6XZF7 1577 aa11.03□□□□□ -0.64
SYNJ2BP-COX16-202ENST00000617124 C1QBPQ07021 282 aaKnown RBP11.03□□□□□ -0.64
SYNJ2BP-COX16-202ENST00000617124 TARBP1Q13395 1621 aaKnown RBP11.02□□□□□ -0.64
SYNJ2BP-COX16-202ENST00000617124 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.01□□□□□ -0.65
SYNJ2BP-COX16-202ENST00000617124 AQRO60306 1485 aaKnown RBP eCLIP11□□□□□ -0.65
SYNJ2BP-COX16-202ENST00000617124 CCDC88BA6NC98 1476 aa11□□□□□ -0.65
SYNJ2BP-COX16-202ENST00000617124 FBLN2P98095 1184 aa10.99□□□□□ -0.65
SYNJ2BP-COX16-202ENST00000617124 NPM3O75607 178 aaKnown RBP10.97□□□□□ -0.65
SYNJ2BP-COX16-202ENST00000617124 POLA1P09884 1462 aaPredicted RBP10.95□□□□□ -0.66
SYNJ2BP-COX16-202ENST00000617124 CLASP1Q7Z460 1538 aa10.94□□□□□ -0.66
SYNJ2BP-COX16-202ENST00000617124 WDR97A6NE52 1622 aa10.93□□□□□ -0.66
SYNJ2BP-COX16-202ENST00000617124 SYNJ1O43426 1573 aa10.93□□□□□ -0.66
SYNJ2BP-COX16-202ENST00000617124 SNAPC4Q5SXM2 1469 aa10.89□□□□□ -0.67
SYNJ2BP-COX16-202ENST00000617124 MAGI1Q96QZ7 1491 aaPredicted RBP10.89□□□□□ -0.67
SYNJ2BP-COX16-202ENST00000617124 CHMP7Q8WUX9 453 aaPredicted RBP10.89□□□□□ -0.67
SYNJ2BP-COX16-202ENST00000617124 TDRD9Q8NDG6 1382 aaKnown RBP10.89□□□□□ -0.67
SYNJ2BP-COX16-202ENST00000617124 RAD54L2Q9Y4B4 1467 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms