Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBXN1Q04323 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.95■□□□□ 0.62
UBXN1Q04323 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBXN1Q04323 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBXN1Q04323 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBXN1Q04323 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBXN1Q04323 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBXN1Q04323 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBXN1Q04323 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBXN1Q04323 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBXN1Q04323 AC078925.2-201ENST00000624013 1973 ntBASIC18.94■□□□□ 0.62
UBXN1Q04323 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBXN1Q04323 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBXN1Q04323 AC011840.4-201ENST00000578471 627 ntBASIC18.94■□□□□ 0.62
UBXN1Q04323 IGHV3-41-201ENST00000613121 348 ntBASIC18.94■□□□□ 0.62
UBXN1Q04323 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.94■□□□□ 0.62
UBXN1Q04323 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBXN1Q04323 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
UBXN1Q04323 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.94■□□□□ 0.62
UBXN1Q04323 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBXN1Q04323 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBXN1Q04323 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.94■□□□□ 0.62
UBXN1Q04323 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.94■□□□□ 0.62
UBXN1Q04323 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBXN1Q04323 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBXN1Q04323 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
UBXN1Q04323 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.93■□□□□ 0.62
UBXN1Q04323 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
UBXN1Q04323 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
UBXN1Q04323 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBXN1Q04323 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBXN1Q04323 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBXN1Q04323 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.93■□□□□ 0.62
UBXN1Q04323 AC079328.2-201ENST00000561241 3354 ntBASIC18.93■□□□□ 0.62
UBXN1Q04323 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBXN1Q04323 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBXN1Q04323 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBXN1Q04323 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.93■□□□□ 0.62
UBXN1Q04323 FAM220CP-201ENST00000395253 831 ntBASIC18.93■□□□□ 0.62
UBXN1Q04323 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.93■□□□□ 0.62
UBXN1Q04323 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.93■□□□□ 0.62
UBXN1Q04323 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.93■□□□□ 0.62
UBXN1Q04323 AC022616.7-201ENST00000525383 220 ntBASIC18.93■□□□□ 0.62
UBXN1Q04323 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.93■□□□□ 0.62
UBXN1Q04323 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.93■□□□□ 0.62
UBXN1Q04323 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.93■□□□□ 0.62
UBXN1Q04323 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.93■□□□□ 0.62
UBXN1Q04323 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBXN1Q04323 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.93■□□□□ 0.62
UBXN1Q04323 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.93■□□□□ 0.62
UBXN1Q04323 LINC01023-201ENST00000606054 436 ntBASIC18.93■□□□□ 0.62
UBXN1Q04323 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBXN1Q04323 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
UBXN1Q04323 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBXN1Q04323 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.93■□□□□ 0.62
UBXN1Q04323 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.93■□□□□ 0.62
UBXN1Q04323 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.93■□□□□ 0.62
UBXN1Q04323 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBXN1Q04323 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBXN1Q04323 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBXN1Q04323 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.93■□□□□ 0.62
UBXN1Q04323 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBXN1Q04323 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBXN1Q04323 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.92■□□□□ 0.62
UBXN1Q04323 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
UBXN1Q04323 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBXN1Q04323 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBXN1Q04323 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
UBXN1Q04323 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBXN1Q04323 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBXN1Q04323 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBXN1Q04323 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBXN1Q04323 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBXN1Q04323 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBXN1Q04323 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.92■□□□□ 0.62
UBXN1Q04323 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBXN1Q04323 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBXN1Q04323 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBXN1Q04323 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBXN1Q04323 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.92■□□□□ 0.62
UBXN1Q04323 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
UBXN1Q04323 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.92■□□□□ 0.62
UBXN1Q04323 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.92■□□□□ 0.62
UBXN1Q04323 AC124947.2-201ENST00000547118 1133 ntBASIC18.92■□□□□ 0.62
UBXN1Q04323 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBXN1Q04323 AC090616.6-201ENST00000582640 721 ntBASIC18.92■□□□□ 0.62
UBXN1Q04323 STK25P1-201ENST00000585406 838 ntBASIC18.92■□□□□ 0.62
UBXN1Q04323 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.92■□□□□ 0.62
UBXN1Q04323 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
UBXN1Q04323 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBXN1Q04323 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBXN1Q04323 EGFEM1P-202ENST00000431685 1563 ntBASIC18.92■□□□□ 0.62
UBXN1Q04323 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
UBXN1Q04323 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
UBXN1Q04323 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.92■□□□□ 0.62
UBXN1Q04323 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBXN1Q04323 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBXN1Q04323 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.92■□□□□ 0.62
UBXN1Q04323 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.92■□□□□ 0.62
UBXN1Q04323 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms