Protein–RNA interactions for Protein: P43026

GDF5, Growth/differentiation factor 5, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF5P43026 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GDF5P43026 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
GDF5P43026 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GDF5P43026 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.84■□□□□ 0.29
GDF5P43026 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.84■□□□□ 0.29
GDF5P43026 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GDF5P43026 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GDF5P43026 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.83■□□□□ 0.29
GDF5P43026 AC084018.2-201ENST00000613093 2607 ntBASIC16.83■□□□□ 0.29
GDF5P43026 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
GDF5P43026 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
GDF5P43026 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
GDF5P43026 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
GDF5P43026 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
GDF5P43026 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
GDF5P43026 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.83■□□□□ 0.28
GDF5P43026 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.83■□□□□ 0.28
GDF5P43026 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
GDF5P43026 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GDF5P43026 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
GDF5P43026 HCG4P8-203ENST00000443049 980 ntBASIC16.83■□□□□ 0.28
GDF5P43026 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
GDF5P43026 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GDF5P43026 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.83■□□□□ 0.28
GDF5P43026 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.83■□□□□ 0.28
GDF5P43026 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GDF5P43026 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.83■□□□□ 0.28
GDF5P43026 AL121761.2-201ENST00000598007 1648 ntBASIC16.83■□□□□ 0.28
GDF5P43026 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GDF5P43026 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GDF5P43026 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.83■□□□□ 0.28
GDF5P43026 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
GDF5P43026 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.83■□□□□ 0.28
GDF5P43026 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GDF5P43026 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
GDF5P43026 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.82■□□□□ 0.28
GDF5P43026 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
GDF5P43026 AC092068.3-201ENST00000587894 2016 ntBASIC16.82■□□□□ 0.28
GDF5P43026 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GDF5P43026 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GDF5P43026 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
GDF5P43026 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GDF5P43026 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.82■□□□□ 0.28
GDF5P43026 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GDF5P43026 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GDF5P43026 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GDF5P43026 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.82■□□□□ 0.28
GDF5P43026 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GDF5P43026 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.82■□□□□ 0.28
GDF5P43026 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.82■□□□□ 0.28
GDF5P43026 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.82■□□□□ 0.28
GDF5P43026 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GDF5P43026 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GDF5P43026 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GDF5P43026 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.82■□□□□ 0.28
GDF5P43026 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GDF5P43026 ABCD1P5-201ENST00000445663 754 ntBASIC16.82■□□□□ 0.28
GDF5P43026 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.82■□□□□ 0.28
GDF5P43026 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.82■□□□□ 0.28
GDF5P43026 AC132008.2-207ENST00000454517 770 ntBASIC16.82■□□□□ 0.28
GDF5P43026 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.82■□□□□ 0.28
GDF5P43026 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.82■□□□□ 0.28
GDF5P43026 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
GDF5P43026 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
GDF5P43026 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GDF5P43026 AC004817.3-201ENST00000602957 2129 ntBASIC16.82■□□□□ 0.28
GDF5P43026 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GDF5P43026 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GDF5P43026 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
GDF5P43026 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
GDF5P43026 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.81■□□□□ 0.28
GDF5P43026 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDF5P43026 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDF5P43026 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GDF5P43026 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDF5P43026 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDF5P43026 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GDF5P43026 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDF5P43026 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDF5P43026 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
GDF5P43026 AC005915.1-201ENST00000624912 2018 ntBASIC16.81■□□□□ 0.28
GDF5P43026 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
GDF5P43026 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GDF5P43026 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
GDF5P43026 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GDF5P43026 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.81■□□□□ 0.28
GDF5P43026 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.81■□□□□ 0.28
GDF5P43026 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.81■□□□□ 0.28
GDF5P43026 KRT16P4-201ENST00000453883 522 ntBASIC16.81■□□□□ 0.28
GDF5P43026 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.81■□□□□ 0.28
GDF5P43026 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.81■□□□□ 0.28
GDF5P43026 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.81■□□□□ 0.28
GDF5P43026 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDF5P43026 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDF5P43026 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
GDF5P43026 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDF5P43026 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GDF5P43026 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDF5P43026 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDF5P43026 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms