Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NFKB1P19838 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NFKB1P19838 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NFKB1P19838 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NFKB1P19838 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NFKB1P19838 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NFKB1P19838 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NFKB1P19838 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NFKB1P19838 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NFKB1P19838 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NFKB1P19838 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NFKB1P19838 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NFKB1P19838 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NFKB1P19838 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NFKB1P19838 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.57■□□□□ 0.4
NFKB1P19838 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
NFKB1P19838 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.57■□□□□ 0.4
NFKB1P19838 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.57■□□□□ 0.4
NFKB1P19838 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
NFKB1P19838 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NFKB1P19838 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.57■□□□□ 0.4
NFKB1P19838 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NFKB1P19838 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.57■□□□□ 0.4
NFKB1P19838 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NFKB1P19838 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NFKB1P19838 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
NFKB1P19838 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.57■□□□□ 0.4
NFKB1P19838 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.57■□□□□ 0.4
NFKB1P19838 AC106795.1-205ENST00000512851 1056 ntBASIC17.57■□□□□ 0.4
NFKB1P19838 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.57■□□□□ 0.4
NFKB1P19838 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.57■□□□□ 0.4
NFKB1P19838 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
NFKB1P19838 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.57■□□□□ 0.4
NFKB1P19838 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NFKB1P19838 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.57■□□□□ 0.4
NFKB1P19838 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.57■□□□□ 0.4
NFKB1P19838 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.57■□□□□ 0.4
NFKB1P19838 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.57■□□□□ 0.4
NFKB1P19838 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.57■□□□□ 0.4
NFKB1P19838 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NFKB1P19838 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NFKB1P19838 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
NFKB1P19838 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NFKB1P19838 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NFKB1P19838 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
NFKB1P19838 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
NFKB1P19838 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NFKB1P19838 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NFKB1P19838 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.57■□□□□ 0.4
NFKB1P19838 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.57■□□□□ 0.4
NFKB1P19838 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NFKB1P19838 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NFKB1P19838 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NFKB1P19838 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.56■□□□□ 0.4
NFKB1P19838 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
NFKB1P19838 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NFKB1P19838 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
NFKB1P19838 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NFKB1P19838 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
NFKB1P19838 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NFKB1P19838 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NFKB1P19838 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.56■□□□□ 0.4
NFKB1P19838 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NFKB1P19838 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NFKB1P19838 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NFKB1P19838 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NFKB1P19838 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NFKB1P19838 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.56■□□□□ 0.4
NFKB1P19838 BX005266.1-201ENST00000473402 457 ntBASIC17.56■□□□□ 0.4
NFKB1P19838 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.56■□□□□ 0.4
NFKB1P19838 AC091304.2-201ENST00000564639 760 ntBASIC17.56■□□□□ 0.4
NFKB1P19838 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.56■□□□□ 0.4
NFKB1P19838 CLEC4GP1-201ENST00000596555 870 ntBASIC17.56■□□□□ 0.4
NFKB1P19838 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
NFKB1P19838 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NFKB1P19838 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NFKB1P19838 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NFKB1P19838 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.56■□□□□ 0.4
NFKB1P19838 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.56■□□□□ 0.4
NFKB1P19838 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NFKB1P19838 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
NFKB1P19838 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NFKB1P19838 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NFKB1P19838 AC097637.2-201ENST00000624096 1997 ntBASIC17.55■□□□□ 0.4
NFKB1P19838 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
NFKB1P19838 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NFKB1P19838 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NFKB1P19838 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NFKB1P19838 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.55■□□□□ 0.4
NFKB1P19838 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NFKB1P19838 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NFKB1P19838 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NFKB1P19838 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.55■□□□□ 0.4
NFKB1P19838 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.55■□□□□ 0.4
NFKB1P19838 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NFKB1P19838 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NFKB1P19838 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.55■□□□□ 0.4
NFKB1P19838 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.55■□□□□ 0.4
NFKB1P19838 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.55■□□□□ 0.4
NFKB1P19838 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms