Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
HOXC6P09630 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC6P09630 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC6P09630 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXC6P09630 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC6P09630 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC6P09630 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
HOXC6P09630 AC138028.4-201ENST00000564984 1845 ntBASIC19.39■□□□□ 0.7
HOXC6P09630 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC6P09630 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
HOXC6P09630 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC6P09630 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC6P09630 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.39■□□□□ 0.69
HOXC6P09630 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC6P09630 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC6P09630 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.39■□□□□ 0.69
HOXC6P09630 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC19.39■□□□□ 0.69
HOXC6P09630 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC6P09630 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC6P09630 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC6P09630 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
HOXC6P09630 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC6P09630 HMGA1P7-201ENST00000406908 502 ntBASIC19.39■□□□□ 0.69
HOXC6P09630 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.39■□□□□ 0.69
HOXC6P09630 SPCS2P4-201ENST00000436160 681 ntBASIC19.39■□□□□ 0.69
HOXC6P09630 KLF2P3-201ENST00000451977 1087 ntBASIC19.39■□□□□ 0.69
HOXC6P09630 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.39■□□□□ 0.69
HOXC6P09630 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.39■□□□□ 0.69
HOXC6P09630 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.39■□□□□ 0.69
HOXC6P09630 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.39■□□□□ 0.69
HOXC6P09630 DUX4L17-201ENST00000557360 1267 ntBASIC19.39■□□□□ 0.69
HOXC6P09630 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.39■□□□□ 0.69
HOXC6P09630 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC6P09630 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC6P09630 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.39■□□□□ 0.69
HOXC6P09630 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
HOXC6P09630 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.39■□□□□ 0.69
HOXC6P09630 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC6P09630 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC6P09630 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC6P09630 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC6P09630 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC6P09630 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.38■□□□□ 0.69
HOXC6P09630 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC6P09630 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC6P09630 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC6P09630 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
HOXC6P09630 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC6P09630 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC6P09630 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC6P09630 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC6P09630 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.38■□□□□ 0.69
HOXC6P09630 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
HOXC6P09630 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC6P09630 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
HOXC6P09630 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.38■□□□□ 0.69
HOXC6P09630 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.38■□□□□ 0.69
HOXC6P09630 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.38■□□□□ 0.69
HOXC6P09630 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
HOXC6P09630 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.38■□□□□ 0.69
HOXC6P09630 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.38■□□□□ 0.69
HOXC6P09630 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC6P09630 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.38■□□□□ 0.69
HOXC6P09630 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC6P09630 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC6P09630 LINC01451-201ENST00000623792 534 ntBASIC19.38■□□□□ 0.69
HOXC6P09630 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.38■□□□□ 0.69
HOXC6P09630 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.38■□□□□ 0.69
HOXC6P09630 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC6P09630 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC6P09630 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.37■□□□□ 0.69
HOXC6P09630 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
HOXC6P09630 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC6P09630 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC6P09630 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
HOXC6P09630 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC6P09630 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
HOXC6P09630 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC6P09630 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.37■□□□□ 0.69
HOXC6P09630 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.37■□□□□ 0.69
HOXC6P09630 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC6P09630 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.37■□□□□ 0.69
HOXC6P09630 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC6P09630 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
HOXC6P09630 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.37■□□□□ 0.69
HOXC6P09630 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC6P09630 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC6P09630 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC6P09630 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.37■□□□□ 0.69
HOXC6P09630 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.37■□□□□ 0.69
HOXC6P09630 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.37■□□□□ 0.69
HOXC6P09630 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.37■□□□□ 0.69
HOXC6P09630 KRT8P23-201ENST00000560090 1207 ntBASIC19.37■□□□□ 0.69
HOXC6P09630 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.37■□□□□ 0.69
HOXC6P09630 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC6P09630 AC005412.3-201ENST00000580309 715 ntBASIC19.37■□□□□ 0.69
HOXC6P09630 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.37■□□□□ 0.69
HOXC6P09630 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.37■□□□□ 0.69
HOXC6P09630 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC6P09630 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms