Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHGBP05060 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
CHGBP05060 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHGBP05060 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHGBP05060 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHGBP05060 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CHGBP05060 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CHGBP05060 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHGBP05060 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHGBP05060 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHGBP05060 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.7■□□□□ 0.9
CHGBP05060 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.7■□□□□ 0.9
CHGBP05060 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.7■□□□□ 0.9
CHGBP05060 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHGBP05060 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.7■□□□□ 0.9
CHGBP05060 AC108751.1-201ENST00000490852 363 ntBASIC20.7■□□□□ 0.9
CHGBP05060 SLC25A6P2-201ENST00000497974 877 ntBASIC20.7■□□□□ 0.9
CHGBP05060 POLD2P1-201ENST00000511220 997 ntBASIC20.7■□□□□ 0.9
CHGBP05060 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.7■□□□□ 0.9
CHGBP05060 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHGBP05060 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.7■□□□□ 0.9
CHGBP05060 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.7■□□□□ 0.9
CHGBP05060 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CHGBP05060 AC008667.4-201ENST00000607370 168 ntBASIC20.7■□□□□ 0.9
CHGBP05060 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CHGBP05060 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
CHGBP05060 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.7■□□□□ 0.9
CHGBP05060 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.7■□□□□ 0.9
CHGBP05060 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHGBP05060 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHGBP05060 LTB4R2-202ENST00000528054 3092 ntBASIC20.7■□□□□ 0.9
CHGBP05060 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHGBP05060 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.7■□□□□ 0.9
CHGBP05060 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHGBP05060 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHGBP05060 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.7■□□□□ 0.9
CHGBP05060 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHGBP05060 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHGBP05060 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHGBP05060 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHGBP05060 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHGBP05060 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.69■□□□□ 0.9
CHGBP05060 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHGBP05060 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.69■□□□□ 0.9
CHGBP05060 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.69■□□□□ 0.9
CHGBP05060 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHGBP05060 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHGBP05060 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
CHGBP05060 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHGBP05060 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
CHGBP05060 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.69■□□□□ 0.9
CHGBP05060 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHGBP05060 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHGBP05060 MIR940-201ENST00000401276 94 ntBASIC20.69■□□□□ 0.9
CHGBP05060 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CHGBP05060 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.69■□□□□ 0.9
CHGBP05060 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.69■□□□□ 0.9
CHGBP05060 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHGBP05060 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.69■□□□□ 0.9
CHGBP05060 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHGBP05060 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHGBP05060 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHGBP05060 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHGBP05060 PI4KAP1-204ENST00000612579 1703 ntBASIC20.69■□□□□ 0.9
CHGBP05060 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
CHGBP05060 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.69■□□□□ 0.9
CHGBP05060 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHGBP05060 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHGBP05060 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHGBP05060 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CHGBP05060 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHGBP05060 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CHGBP05060 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHGBP05060 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.68■□□□□ 0.9
CHGBP05060 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
CHGBP05060 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHGBP05060 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHGBP05060 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHGBP05060 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHGBP05060 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHGBP05060 IGLL3P-201ENST00000412472 434 ntBASIC20.68■□□□□ 0.9
CHGBP05060 PAWRP1-201ENST00000451083 565 ntBASIC20.68■□□□□ 0.9
CHGBP05060 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.68■□□□□ 0.9
CHGBP05060 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.68■□□□□ 0.9
CHGBP05060 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
CHGBP05060 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHGBP05060 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHGBP05060 MIR1199-201ENST00000621445 119 ntBASIC20.68■□□□□ 0.9
CHGBP05060 AC005593.1-201ENST00000624894 515 ntBASIC20.68■□□□□ 0.9
CHGBP05060 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHGBP05060 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CHGBP05060 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHGBP05060 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC20.68■□□□□ 0.9
CHGBP05060 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHGBP05060 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHGBP05060 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHGBP05060 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHGBP05060 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHGBP05060 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHGBP05060 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms