Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LGR5O75473 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LGR5O75473 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.09■□□□□ 0.65
LGR5O75473 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.09■□□□□ 0.65
LGR5O75473 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.09■□□□□ 0.65
LGR5O75473 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
LGR5O75473 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LGR5O75473 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LGR5O75473 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LGR5O75473 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LGR5O75473 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LGR5O75473 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
LGR5O75473 AC020763.4-201ENST00000623414 4170 ntBASIC19.08■□□□□ 0.65
LGR5O75473 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.08■□□□□ 0.65
LGR5O75473 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
LGR5O75473 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LGR5O75473 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LGR5O75473 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LGR5O75473 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.08■□□□□ 0.64
LGR5O75473 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.08■□□□□ 0.64
LGR5O75473 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.08■□□□□ 0.64
LGR5O75473 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.08■□□□□ 0.64
LGR5O75473 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.64
LGR5O75473 AL031432.2-201ENST00000566714 459 ntBASIC19.08■□□□□ 0.64
LGR5O75473 AL928711.1-201ENST00000570165 459 ntBASIC19.08■□□□□ 0.64
LGR5O75473 REXO1L3P-201ENST00000622202 1288 ntBASIC19.08■□□□□ 0.64
LGR5O75473 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.08■□□□□ 0.64
LGR5O75473 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
LGR5O75473 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LGR5O75473 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
LGR5O75473 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LGR5O75473 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LGR5O75473 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LGR5O75473 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
LGR5O75473 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LGR5O75473 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
LGR5O75473 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LGR5O75473 AL138688.1-201ENST00000624851 1594 ntBASIC19.07■□□□□ 0.64
LGR5O75473 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
LGR5O75473 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.07■□□□□ 0.64
LGR5O75473 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LGR5O75473 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LGR5O75473 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.07■□□□□ 0.64
LGR5O75473 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LGR5O75473 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.07■□□□□ 0.64
LGR5O75473 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LGR5O75473 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.07■□□□□ 0.64
LGR5O75473 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.07■□□□□ 0.64
LGR5O75473 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.07■□□□□ 0.64
LGR5O75473 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.07■□□□□ 0.64
LGR5O75473 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.07■□□□□ 0.64
LGR5O75473 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
LGR5O75473 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.07■□□□□ 0.64
LGR5O75473 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LGR5O75473 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LGR5O75473 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LGR5O75473 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.07■□□□□ 0.64
LGR5O75473 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LGR5O75473 AC134043.2-201ENST00000624206 2238 ntBASIC19.06■□□□□ 0.64
LGR5O75473 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LGR5O75473 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LGR5O75473 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LGR5O75473 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
LGR5O75473 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.06■□□□□ 0.64
LGR5O75473 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LGR5O75473 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.06■□□□□ 0.64
LGR5O75473 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LGR5O75473 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.06■□□□□ 0.64
LGR5O75473 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LGR5O75473 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LGR5O75473 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.06■□□□□ 0.64
LGR5O75473 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LGR5O75473 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.06■□□□□ 0.64
LGR5O75473 AL513480.1-201ENST00000451731 511 ntBASIC19.06■□□□□ 0.64
LGR5O75473 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LGR5O75473 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.06■□□□□ 0.64
LGR5O75473 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.06■□□□□ 0.64
LGR5O75473 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.06■□□□□ 0.64
LGR5O75473 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.06■□□□□ 0.64
LGR5O75473 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.06■□□□□ 0.64
LGR5O75473 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.06■□□□□ 0.64
LGR5O75473 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.06■□□□□ 0.64
LGR5O75473 MIR3197-201ENST00000582241 73 ntBASIC19.06■□□□□ 0.64
LGR5O75473 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LGR5O75473 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.06■□□□□ 0.64
LGR5O75473 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.06■□□□□ 0.64
LGR5O75473 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.06■□□□□ 0.64
LGR5O75473 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LGR5O75473 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
LGR5O75473 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
LGR5O75473 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
LGR5O75473 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LGR5O75473 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.06■□□□□ 0.64
LGR5O75473 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.06■□□□□ 0.64
LGR5O75473 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.06■□□□□ 0.64
LGR5O75473 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
LGR5O75473 EGFEM1P-202ENST00000431685 1563 ntBASIC19.06■□□□□ 0.64
LGR5O75473 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LGR5O75473 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.05■□□□□ 0.64
LGR5O75473 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms