Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSSCA1O60232 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SSSCA1O60232 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC14.14□□□□□ -0.15
SSSCA1O60232 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC14.14□□□□□ -0.15
SSSCA1O60232 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSSCA1O60232 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC14.14□□□□□ -0.15
SSSCA1O60232 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.14□□□□□ -0.15
SSSCA1O60232 AC113404.2-201ENST00000507884 177 ntBASIC14.14□□□□□ -0.15
SSSCA1O60232 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SSSCA1O60232 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.14□□□□□ -0.15
SSSCA1O60232 MMD2-204ENST00000612910 778 ntTSL 5 BASIC14.14□□□□□ -0.15
SSSCA1O60232 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSSCA1O60232 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SSSCA1O60232 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSSCA1O60232 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSSCA1O60232 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
SSSCA1O60232 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SSSCA1O60232 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC14.14□□□□□ -0.15
SSSCA1O60232 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSSCA1O60232 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SSSCA1O60232 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSSCA1O60232 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSSCA1O60232 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSSCA1O60232 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SSSCA1O60232 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSSCA1O60232 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
SSSCA1O60232 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
SSSCA1O60232 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSSCA1O60232 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SSSCA1O60232 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSSCA1O60232 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSSCA1O60232 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SSSCA1O60232 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SSSCA1O60232 LINC00554-201ENST00000564841 3011 ntBASIC14.13□□□□□ -0.15
SSSCA1O60232 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SSSCA1O60232 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.13□□□□□ -0.15
SSSCA1O60232 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSSCA1O60232 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSSCA1O60232 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSSCA1O60232 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSSCA1O60232 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SSSCA1O60232 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SSSCA1O60232 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC14.13□□□□□ -0.15
SSSCA1O60232 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SSSCA1O60232 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.13□□□□□ -0.15
SSSCA1O60232 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSSCA1O60232 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC14.13□□□□□ -0.15
SSSCA1O60232 AC090192.1-201ENST00000517740 490 ntBASIC14.13□□□□□ -0.15
SSSCA1O60232 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.13□□□□□ -0.15
SSSCA1O60232 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC14.13□□□□□ -0.15
SSSCA1O60232 AC092865.7-201ENST00000641832 219 ntBASIC14.13□□□□□ -0.15
SSSCA1O60232 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSSCA1O60232 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSSCA1O60232 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SSSCA1O60232 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SSSCA1O60232 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
SSSCA1O60232 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSSCA1O60232 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.13□□□□□ -0.15
SSSCA1O60232 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.13□□□□□ -0.15
SSSCA1O60232 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.13□□□□□ -0.15
SSSCA1O60232 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SSSCA1O60232 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSSCA1O60232 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSSCA1O60232 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSSCA1O60232 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC14.13□□□□□ -0.15
SSSCA1O60232 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSSCA1O60232 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSSCA1O60232 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
SSSCA1O60232 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSSCA1O60232 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSSCA1O60232 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSSCA1O60232 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSSCA1O60232 AL513523.2-202ENST00000427283 2040 ntBASIC14.12□□□□□ -0.15
SSSCA1O60232 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSSCA1O60232 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.12□□□□□ -0.15
SSSCA1O60232 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSSCA1O60232 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSSCA1O60232 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.12□□□□□ -0.15
SSSCA1O60232 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSSCA1O60232 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
SSSCA1O60232 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SSSCA1O60232 PVRIG2P-201ENST00000435460 978 ntBASIC14.12□□□□□ -0.15
SSSCA1O60232 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.12□□□□□ -0.15
SSSCA1O60232 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SSSCA1O60232 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SSSCA1O60232 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.12□□□□□ -0.15
SSSCA1O60232 MIR3917-201ENST00000580971 93 ntBASIC14.12□□□□□ -0.15
SSSCA1O60232 AC116562.4-202ENST00000641738 218 ntBASIC14.12□□□□□ -0.15
SSSCA1O60232 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSSCA1O60232 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSSCA1O60232 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSSCA1O60232 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSSCA1O60232 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSSCA1O60232 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.12□□□□□ -0.15
SSSCA1O60232 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SSSCA1O60232 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSSCA1O60232 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSSCA1O60232 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.12□□□□□ -0.15
SSSCA1O60232 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SSSCA1O60232 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms