Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 AL450487.1-201ENST00000426799 995 ntBASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 AC122714.2-201ENST00000502787 707 ntBASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 KRT126P-201ENST00000549467 1181 ntBASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 IFNL4P1-201ENST00000607083 540 ntBASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF25A6NGN4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.21■□□□□ 0.18
PRAMEF25A6NGN4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
PRAMEF25A6NGN4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PRAMEF25A6NGN4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF25A6NGN4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF25A6NGN4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF25A6NGN4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PRAMEF25A6NGN4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF25A6NGN4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
PRAMEF25A6NGN4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF25A6NGN4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PRAMEF25A6NGN4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PRAMEF25A6NGN4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF25A6NGN4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF25A6NGN4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF25A6NGN4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF25A6NGN4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF25A6NGN4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF25A6NGN4 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF25A6NGN4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF25A6NGN4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF25A6NGN4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.2■□□□□ 0.18
PRAMEF25A6NGN4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.2■□□□□ 0.18
PRAMEF25A6NGN4 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.2■□□□□ 0.18
PRAMEF25A6NGN4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF25A6NGN4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.2■□□□□ 0.18
PRAMEF25A6NGN4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.2■□□□□ 0.18
PRAMEF25A6NGN4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.2■□□□□ 0.18
PRAMEF25A6NGN4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PRAMEF25A6NGN4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF25A6NGN4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PRAMEF25A6NGN4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PRAMEF25A6NGN4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF25A6NGN4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF25A6NGN4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF25A6NGN4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF25A6NGN4 LINC02012-201ENST00000608206 1725 ntBASIC16.19■□□□□ 0.18
PRAMEF25A6NGN4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF25A6NGN4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.19■□□□□ 0.18
PRAMEF25A6NGN4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF25A6NGN4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF25A6NGN4 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF25A6NGN4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF25A6NGN4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF25A6NGN4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF25A6NGN4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.19■□□□□ 0.18
PRAMEF25A6NGN4 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF25A6NGN4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF25A6NGN4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.19■□□□□ 0.18
PRAMEF25A6NGN4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF25A6NGN4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF25A6NGN4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF25A6NGN4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.19■□□□□ 0.18
PRAMEF25A6NGN4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF25A6NGN4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.19■□□□□ 0.18
PRAMEF25A6NGN4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.19■□□□□ 0.18
PRAMEF25A6NGN4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.19■□□□□ 0.18
PRAMEF25A6NGN4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF25A6NGN4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.19■□□□□ 0.18
PRAMEF25A6NGN4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms