Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-7A0A0A0MS04 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 AC073508.3-201ENST00000619697 1419 ntBASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 AC093525.9-201ENST00000624961 1746 ntBASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 SLC25A1P3-201ENST00000395415 828 ntBASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-7A0A0A0MS04 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 RNF152P1-201ENST00000397754 604 ntBASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 TSPY5P-201ENST00000426936 936 ntBASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 SAPCD2P2-201ENST00000431719 1174 ntBASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 KRT18P38-201ENST00000449496 1282 ntBASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 AC097493.4-201ENST00000641197 219 ntBASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV6-7A0A0A0MS04 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 AC078925.2-201ENST00000624013 1973 ntBASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms