Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CNTNAP4Q9C0A0 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CNTNAP4Q9C0A0 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CNTNAP4Q9C0A0 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CNTNAP4Q9C0A0 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CNTNAP4Q9C0A0 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CNTNAP4Q9C0A0 AC073592.8-201ENST00000624126 511 ntBASIC21.55■■□□□ 1.04
CNTNAP4Q9C0A0 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC21.55■■□□□ 1.04
CNTNAP4Q9C0A0 AL358472.5-202ENST00000641448 1267 ntBASIC21.55■■□□□ 1.04
CNTNAP4Q9C0A0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CNTNAP4Q9C0A0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
CNTNAP4Q9C0A0 AC016027.1-202ENST00000607927 1699 ntBASIC21.54■■□□□ 1.04
CNTNAP4Q9C0A0 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC21.54■■□□□ 1.04
CNTNAP4Q9C0A0 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CNTNAP4Q9C0A0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CNTNAP4Q9C0A0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CNTNAP4Q9C0A0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CNTNAP4Q9C0A0 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CNTNAP4Q9C0A0 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CNTNAP4Q9C0A0 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CNTNAP4Q9C0A0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CNTNAP4Q9C0A0 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC21.54■■□□□ 1.04
CNTNAP4Q9C0A0 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CNTNAP4Q9C0A0 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CNTNAP4Q9C0A0 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CNTNAP4Q9C0A0 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC21.54■■□□□ 1.04
CNTNAP4Q9C0A0 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CNTNAP4Q9C0A0 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC21.54■■□□□ 1.04
CNTNAP4Q9C0A0 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC21.54■■□□□ 1.04
CNTNAP4Q9C0A0 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC21.54■■□□□ 1.04
CNTNAP4Q9C0A0 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC21.54■■□□□ 1.04
CNTNAP4Q9C0A0 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC21.54■■□□□ 1.04
CNTNAP4Q9C0A0 NKG7-205ENST00000600427 520 ntTSL 3 BASIC21.54■■□□□ 1.04
CNTNAP4Q9C0A0 AC025048.6-201ENST00000634326 1161 ntBASIC21.54■■□□□ 1.04
CNTNAP4Q9C0A0 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC21.54■■□□□ 1.04
CNTNAP4Q9C0A0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CNTNAP4Q9C0A0 AC100757.3-201ENST00000622361 1406 ntBASIC21.53■■□□□ 1.04
CNTNAP4Q9C0A0 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
CNTNAP4Q9C0A0 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CNTNAP4Q9C0A0 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CNTNAP4Q9C0A0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
CNTNAP4Q9C0A0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CNTNAP4Q9C0A0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CNTNAP4Q9C0A0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CNTNAP4Q9C0A0 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CNTNAP4Q9C0A0 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC21.53■■□□□ 1.04
CNTNAP4Q9C0A0 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CNTNAP4Q9C0A0 AC142381.1-201ENST00000426099 345 ntBASIC21.53■■□□□ 1.04
CNTNAP4Q9C0A0 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC21.53■■□□□ 1.04
CNTNAP4Q9C0A0 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CNTNAP4Q9C0A0 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC21.53■■□□□ 1.04
CNTNAP4Q9C0A0 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC21.53■■□□□ 1.04
CNTNAP4Q9C0A0 COQ9-214ENST00000567933 882 ntTSL 3 BASIC21.53■■□□□ 1.04
CNTNAP4Q9C0A0 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC21.53■■□□□ 1.04
CNTNAP4Q9C0A0 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC21.53■■□□□ 1.04
CNTNAP4Q9C0A0 WT1-AS_2.1-201ENST00000613208 137 ntBASIC21.53■■□□□ 1.04
CNTNAP4Q9C0A0 AC009118.2-201ENST00000613275 655 ntBASIC21.53■■□□□ 1.04
CNTNAP4Q9C0A0 AL662799.1-202ENST00000614205 422 ntBASIC21.53■■□□□ 1.04
CNTNAP4Q9C0A0 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC21.53■■□□□ 1.04
CNTNAP4Q9C0A0 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CNTNAP4Q9C0A0 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.52■■□□□ 1.04
CNTNAP4Q9C0A0 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CNTNAP4Q9C0A0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
CNTNAP4Q9C0A0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CNTNAP4Q9C0A0 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CNTNAP4Q9C0A0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CNTNAP4Q9C0A0 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CNTNAP4Q9C0A0 TOP3BP1-201ENST00000420768 1380 ntBASIC21.52■■□□□ 1.04
CNTNAP4Q9C0A0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CNTNAP4Q9C0A0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CNTNAP4Q9C0A0 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CNTNAP4Q9C0A0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.52■■□□□ 1.04
CNTNAP4Q9C0A0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.04
CNTNAP4Q9C0A0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CNTNAP4Q9C0A0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CNTNAP4Q9C0A0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.52■■□□□ 1.04
CNTNAP4Q9C0A0 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC21.52■■□□□ 1.04
CNTNAP4Q9C0A0 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CNTNAP4Q9C0A0 PIN1P1-201ENST00000412108 996 ntBASIC21.52■■□□□ 1.03
CNTNAP4Q9C0A0 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CNTNAP4Q9C0A0 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC21.52■■□□□ 1.03
CNTNAP4Q9C0A0 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
CNTNAP4Q9C0A0 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
CNTNAP4Q9C0A0 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CNTNAP4Q9C0A0 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
CNTNAP4Q9C0A0 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC21.52■■□□□ 1.03
CNTNAP4Q9C0A0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CNTNAP4Q9C0A0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.51■■□□□ 1.03
CNTNAP4Q9C0A0 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CNTNAP4Q9C0A0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.51■■□□□ 1.03
CNTNAP4Q9C0A0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CNTNAP4Q9C0A0 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC21.51■■□□□ 1.03
CNTNAP4Q9C0A0 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
CNTNAP4Q9C0A0 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CNTNAP4Q9C0A0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CNTNAP4Q9C0A0 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CNTNAP4Q9C0A0 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CNTNAP4Q9C0A0 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CNTNAP4Q9C0A0 CALY-202ENST00000368555 783 ntTSL 2 BASIC21.51■■□□□ 1.03
CNTNAP4Q9C0A0 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms