Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.97■□□□□ 0.31
NPAS2Q99743 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.97■□□□□ 0.31
NPAS2Q99743 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.97■□□□□ 0.31
NPAS2Q99743 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.97■□□□□ 0.31
NPAS2Q99743 KRT126P-201ENST00000549467 1181 ntBASIC16.97■□□□□ 0.31
NPAS2Q99743 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.97■□□□□ 0.31
NPAS2Q99743 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
NPAS2Q99743 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.97■□□□□ 0.31
NPAS2Q99743 AP002414.4-201ENST00000589764 1148 ntBASIC16.97■□□□□ 0.31
NPAS2Q99743 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.97■□□□□ 0.31
NPAS2Q99743 AL390719.2-201ENST00000606993 987 ntBASIC16.97■□□□□ 0.31
NPAS2Q99743 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS2Q99743 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS2Q99743 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS2Q99743 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS2Q99743 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS2Q99743 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.97■□□□□ 0.31
NPAS2Q99743 AC008741.2-201ENST00000612792 3115 ntBASIC16.97■□□□□ 0.31
NPAS2Q99743 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
NPAS2Q99743 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.97■□□□□ 0.31
NPAS2Q99743 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS2Q99743 AC079328.2-201ENST00000561241 3354 ntBASIC16.97■□□□□ 0.31
NPAS2Q99743 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPAS2Q99743 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS2Q99743 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.96■□□□□ 0.31
NPAS2Q99743 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS2Q99743 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.96■□□□□ 0.31
NPAS2Q99743 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS2Q99743 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS2Q99743 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.96■□□□□ 0.31
NPAS2Q99743 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS2Q99743 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS2Q99743 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS2Q99743 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS2Q99743 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS2Q99743 LYSMD4-203ENST00000378904 2122 ntBASIC16.96■□□□□ 0.31
NPAS2Q99743 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS2Q99743 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS2Q99743 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.96■□□□□ 0.31
NPAS2Q99743 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS2Q99743 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS2Q99743 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS2Q99743 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS2Q99743 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS2Q99743 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS2Q99743 CHCHD2P8-201ENST00000429873 447 ntBASIC16.96■□□□□ 0.31
NPAS2Q99743 AP003733.1-201ENST00000491725 852 ntBASIC16.96■□□□□ 0.31
NPAS2Q99743 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS2Q99743 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.96■□□□□ 0.31
NPAS2Q99743 AC092329.2-201ENST00000598402 547 ntBASIC16.96■□□□□ 0.31
NPAS2Q99743 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
NPAS2Q99743 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS2Q99743 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPAS2Q99743 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
NPAS2Q99743 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.96■□□□□ 0.31
NPAS2Q99743 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.96■□□□□ 0.31
NPAS2Q99743 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
NPAS2Q99743 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
NPAS2Q99743 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
NPAS2Q99743 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
NPAS2Q99743 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
NPAS2Q99743 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
NPAS2Q99743 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NPAS2Q99743 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
NPAS2Q99743 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
NPAS2Q99743 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
NPAS2Q99743 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NPAS2Q99743 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NPAS2Q99743 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.95■□□□□ 0.3
NPAS2Q99743 KRT8P47-201ENST00000604727 1398 ntBASIC16.95■□□□□ 0.3
NPAS2Q99743 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NPAS2Q99743 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NPAS2Q99743 DDX43P3-201ENST00000441064 443 ntBASIC16.95■□□□□ 0.3
NPAS2Q99743 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NPAS2Q99743 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.95■□□□□ 0.3
NPAS2Q99743 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.95■□□□□ 0.3
NPAS2Q99743 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.95■□□□□ 0.3
NPAS2Q99743 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.95■□□□□ 0.3
NPAS2Q99743 AC024563.2-201ENST00000603282 481 ntBASIC16.95■□□□□ 0.3
NPAS2Q99743 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
NPAS2Q99743 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.95■□□□□ 0.3
NPAS2Q99743 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NPAS2Q99743 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NPAS2Q99743 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NPAS2Q99743 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NPAS2Q99743 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NPAS2Q99743 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NPAS2Q99743 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NPAS2Q99743 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NPAS2Q99743 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.95■□□□□ 0.3
NPAS2Q99743 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.95■□□□□ 0.3
NPAS2Q99743 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.95■□□□□ 0.3
NPAS2Q99743 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NPAS2Q99743 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
NPAS2Q99743 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NPAS2Q99743 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NPAS2Q99743 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NPAS2Q99743 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.95■□□□□ 0.3
NPAS2Q99743 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NPAS2Q99743 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms