Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CRAMP1Q96RY5 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CRAMP1Q96RY5 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CRAMP1Q96RY5 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CRAMP1Q96RY5 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.96■□□□□ 0.95
CRAMP1Q96RY5 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CRAMP1Q96RY5 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CRAMP1Q96RY5 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.96■□□□□ 0.95
CRAMP1Q96RY5 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CRAMP1Q96RY5 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.96■□□□□ 0.95
CRAMP1Q96RY5 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CRAMP1Q96RY5 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CRAMP1Q96RY5 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.96■□□□□ 0.95
CRAMP1Q96RY5 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CRAMP1Q96RY5 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC20.96■□□□□ 0.95
CRAMP1Q96RY5 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CRAMP1Q96RY5 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC20.96■□□□□ 0.95
CRAMP1Q96RY5 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC20.96■□□□□ 0.95
CRAMP1Q96RY5 SLC25A39P2-201ENST00000537614 270 ntBASIC20.96■□□□□ 0.95
CRAMP1Q96RY5 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC20.96■□□□□ 0.95
CRAMP1Q96RY5 RBM7-207ENST00000544582 692 ntTSL 3 BASIC20.96■□□□□ 0.95
CRAMP1Q96RY5 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC20.96■□□□□ 0.95
CRAMP1Q96RY5 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
CRAMP1Q96RY5 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC20.96■□□□□ 0.95
CRAMP1Q96RY5 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CRAMP1Q96RY5 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20.96■□□□□ 0.95
CRAMP1Q96RY5 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.96■□□□□ 0.95
CRAMP1Q96RY5 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CRAMP1Q96RY5 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CRAMP1Q96RY5 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CRAMP1Q96RY5 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CRAMP1Q96RY5 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.95■□□□□ 0.94
CRAMP1Q96RY5 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CRAMP1Q96RY5 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CRAMP1Q96RY5 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.95■□□□□ 0.94
CRAMP1Q96RY5 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.95■□□□□ 0.94
CRAMP1Q96RY5 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CRAMP1Q96RY5 MIR346-201ENST00000362234 95 ntBASIC20.95■□□□□ 0.94
CRAMP1Q96RY5 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC20.95■□□□□ 0.94
CRAMP1Q96RY5 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CRAMP1Q96RY5 AL035252.4-201ENST00000624174 288 ntBASIC20.95■□□□□ 0.94
CRAMP1Q96RY5 AC008267.7-201ENST00000624570 1194 ntBASIC20.95■□□□□ 0.94
CRAMP1Q96RY5 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.95■□□□□ 0.94
CRAMP1Q96RY5 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CRAMP1Q96RY5 AC063926.2-201ENST00000623766 1308 ntBASIC20.95■□□□□ 0.94
CRAMP1Q96RY5 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CRAMP1Q96RY5 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CRAMP1Q96RY5 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CRAMP1Q96RY5 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.95■□□□□ 0.94
CRAMP1Q96RY5 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CRAMP1Q96RY5 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CRAMP1Q96RY5 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CRAMP1Q96RY5 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CRAMP1Q96RY5 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CRAMP1Q96RY5 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CRAMP1Q96RY5 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CRAMP1Q96RY5 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.94■□□□□ 0.94
CRAMP1Q96RY5 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CRAMP1Q96RY5 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CRAMP1Q96RY5 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CRAMP1Q96RY5 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CRAMP1Q96RY5 AC005034.1-201ENST00000426657 489 ntBASIC20.94■□□□□ 0.94
CRAMP1Q96RY5 MTRF1LP2-201ENST00000506027 1122 ntBASIC20.94■□□□□ 0.94
CRAMP1Q96RY5 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC20.94■□□□□ 0.94
CRAMP1Q96RY5 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC20.94■□□□□ 0.94
CRAMP1Q96RY5 ALG1L8P-201ENST00000533887 760 ntBASIC20.94■□□□□ 0.94
CRAMP1Q96RY5 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CRAMP1Q96RY5 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC20.94■□□□□ 0.94
CRAMP1Q96RY5 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CRAMP1Q96RY5 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CRAMP1Q96RY5 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
CRAMP1Q96RY5 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC20.94■□□□□ 0.94
CRAMP1Q96RY5 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC20.94■□□□□ 0.94
CRAMP1Q96RY5 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CRAMP1Q96RY5 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
CRAMP1Q96RY5 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CRAMP1Q96RY5 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CRAMP1Q96RY5 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CRAMP1Q96RY5 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CRAMP1Q96RY5 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.93■□□□□ 0.94
CRAMP1Q96RY5 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
CRAMP1Q96RY5 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CRAMP1Q96RY5 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CRAMP1Q96RY5 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CRAMP1Q96RY5 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CRAMP1Q96RY5 RNU1-129P-201ENST00000384064 167 ntBASIC20.93■□□□□ 0.94
CRAMP1Q96RY5 METTL26-204ENST00000397665 558 ntTSL 2 BASIC20.93■□□□□ 0.94
CRAMP1Q96RY5 RAC2-204ENST00000406508 893 ntTSL 5 BASIC20.93■□□□□ 0.94
CRAMP1Q96RY5 AC097493.3-201ENST00000509725 367 ntBASIC20.93■□□□□ 0.94
CRAMP1Q96RY5 AP000842.3-202ENST00000569238 1080 ntBASIC20.93■□□□□ 0.94
CRAMP1Q96RY5 MIR3909-201ENST00000579518 119 ntBASIC20.93■□□□□ 0.94
CRAMP1Q96RY5 U1.21-201ENST00000580816 167 ntBASIC20.93■□□□□ 0.94
CRAMP1Q96RY5 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC20.93■□□□□ 0.94
CRAMP1Q96RY5 LINC02560-201ENST00000596379 459 ntBASIC20.93■□□□□ 0.94
CRAMP1Q96RY5 AC008761.3-201ENST00000624803 892 ntBASIC20.93■□□□□ 0.94
CRAMP1Q96RY5 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CRAMP1Q96RY5 HFE2-206ENST00000634927 506 ntTSL 4 BASIC20.93■□□□□ 0.94
CRAMP1Q96RY5 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CRAMP1Q96RY5 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CRAMP1Q96RY5 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms