Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM11Q96F44 PMPCAP1-201ENST00000508114 1576 ntBASIC18.3■□□□□ 0.52
TRIM11Q96F44 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TRIM11Q96F44 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM11Q96F44 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM11Q96F44 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM11Q96F44 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM11Q96F44 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM11Q96F44 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM11Q96F44 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM11Q96F44 RCN1P2-201ENST00000398357 915 ntBASIC18.3■□□□□ 0.52
TRIM11Q96F44 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.3■□□□□ 0.52
TRIM11Q96F44 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
TRIM11Q96F44 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.3■□□□□ 0.52
TRIM11Q96F44 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM11Q96F44 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM11Q96F44 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TRIM11Q96F44 AC012615.1-201ENST00000565797 1299 ntBASIC18.3■□□□□ 0.52
TRIM11Q96F44 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
TRIM11Q96F44 AC091076.1-201ENST00000610741 619 ntBASIC18.3■□□□□ 0.52
TRIM11Q96F44 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
TRIM11Q96F44 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.3■□□□□ 0.52
TRIM11Q96F44 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM11Q96F44 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TRIM11Q96F44 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TRIM11Q96F44 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TRIM11Q96F44 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM11Q96F44 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TRIM11Q96F44 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM11Q96F44 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM11Q96F44 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM11Q96F44 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM11Q96F44 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM11Q96F44 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM11Q96F44 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM11Q96F44 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM11Q96F44 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM11Q96F44 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM11Q96F44 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM11Q96F44 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM11Q96F44 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
TRIM11Q96F44 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM11Q96F44 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
TRIM11Q96F44 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM11Q96F44 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
TRIM11Q96F44 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TRIM11Q96F44 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM11Q96F44 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.29■□□□□ 0.52
TRIM11Q96F44 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM11Q96F44 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.29■□□□□ 0.52
TRIM11Q96F44 MIR3180-1-201ENST00000580374 94 ntBASIC18.29■□□□□ 0.52
TRIM11Q96F44 MIR3180-3-201ENST00000584616 94 ntBASIC18.29■□□□□ 0.52
TRIM11Q96F44 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
TRIM11Q96F44 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM11Q96F44 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM11Q96F44 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.29■□□□□ 0.52
TRIM11Q96F44 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM11Q96F44 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.29■□□□□ 0.52
TRIM11Q96F44 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM11Q96F44 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM11Q96F44 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM11Q96F44 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM11Q96F44 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
TRIM11Q96F44 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM11Q96F44 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM11Q96F44 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM11Q96F44 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM11Q96F44 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.28■□□□□ 0.52
TRIM11Q96F44 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM11Q96F44 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.28■□□□□ 0.52
TRIM11Q96F44 AC011676.5-201ENST00000624864 2660 ntBASIC18.28■□□□□ 0.52
TRIM11Q96F44 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM11Q96F44 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TRIM11Q96F44 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM11Q96F44 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM11Q96F44 GPR89P-201ENST00000407924 1495 ntBASIC18.28■□□□□ 0.52
TRIM11Q96F44 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM11Q96F44 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
TRIM11Q96F44 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM11Q96F44 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.28■□□□□ 0.52
TRIM11Q96F44 AC092053.1-201ENST00000605787 1936 ntBASIC18.28■□□□□ 0.52
TRIM11Q96F44 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM11Q96F44 AL020989.1-201ENST00000422979 469 ntBASIC18.28■□□□□ 0.52
TRIM11Q96F44 SIGLEC30P-201ENST00000455569 941 ntBASIC18.28■□□□□ 0.52
TRIM11Q96F44 AP000867.3-201ENST00000524675 377 ntBASIC18.28■□□□□ 0.52
TRIM11Q96F44 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.28■□□□□ 0.52
TRIM11Q96F44 NPAP1P7-201ENST00000613027 823 ntBASIC18.28■□□□□ 0.52
TRIM11Q96F44 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TRIM11Q96F44 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM11Q96F44 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM11Q96F44 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM11Q96F44 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM11Q96F44 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM11Q96F44 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM11Q96F44 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.28■□□□□ 0.52
TRIM11Q96F44 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.28■□□□□ 0.52
TRIM11Q96F44 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.28■□□□□ 0.52
TRIM11Q96F44 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TRIM11Q96F44 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TRIM11Q96F44 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms