Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM35BQ8NCS4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM35BQ8NCS4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.33■□□□□ 0.52
TMEM35BQ8NCS4 CLEC4GP1-201ENST00000596555 870 ntBASIC18.33■□□□□ 0.52
TMEM35BQ8NCS4 LINC01711-201ENST00000598340 967 ntBASIC18.33■□□□□ 0.52
TMEM35BQ8NCS4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM35BQ8NCS4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM35BQ8NCS4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM35BQ8NCS4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM35BQ8NCS4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM35BQ8NCS4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM35BQ8NCS4 EGFEM1P-202ENST00000431685 1563 ntBASIC18.33■□□□□ 0.52
TMEM35BQ8NCS4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
TMEM35BQ8NCS4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.33■□□□□ 0.52
TMEM35BQ8NCS4 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
TMEM35BQ8NCS4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM35BQ8NCS4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
TMEM35BQ8NCS4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM35BQ8NCS4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM35BQ8NCS4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM35BQ8NCS4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.33■□□□□ 0.52
TMEM35BQ8NCS4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM35BQ8NCS4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
TMEM35BQ8NCS4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM35BQ8NCS4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM35BQ8NCS4 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM35BQ8NCS4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
TMEM35BQ8NCS4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.32■□□□□ 0.52
TMEM35BQ8NCS4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM35BQ8NCS4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM35BQ8NCS4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM35BQ8NCS4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.32■□□□□ 0.52
TMEM35BQ8NCS4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.32■□□□□ 0.52
TMEM35BQ8NCS4 ACTG1P4-201ENST00000425123 1122 ntBASIC18.32■□□□□ 0.52
TMEM35BQ8NCS4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM35BQ8NCS4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.32■□□□□ 0.52
TMEM35BQ8NCS4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.32■□□□□ 0.52
TMEM35BQ8NCS4 KRT18P56-201ENST00000507275 550 ntBASIC18.32■□□□□ 0.52
TMEM35BQ8NCS4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM35BQ8NCS4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.32■□□□□ 0.52
TMEM35BQ8NCS4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM35BQ8NCS4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM35BQ8NCS4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.32■□□□□ 0.52
TMEM35BQ8NCS4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM35BQ8NCS4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM35BQ8NCS4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM35BQ8NCS4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM35BQ8NCS4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.32■□□□□ 0.52
TMEM35BQ8NCS4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 PRYP5-201ENST00000451909 266 ntBASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 MTDHP3-201ENST00000594186 672 ntBASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 AC097637.2-201ENST00000624096 1997 ntBASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 AL121761.2-201ENST00000598007 1648 ntBASIC18.31■□□□□ 0.52
TMEM35BQ8NCS4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TMEM35BQ8NCS4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM35BQ8NCS4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM35BQ8NCS4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.3■□□□□ 0.52
TMEM35BQ8NCS4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM35BQ8NCS4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM35BQ8NCS4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM35BQ8NCS4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.3■□□□□ 0.52
TMEM35BQ8NCS4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM35BQ8NCS4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TMEM35BQ8NCS4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms