Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO1Q2MKA7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO1Q2MKA7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RSPO1Q2MKA7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO1Q2MKA7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO1Q2MKA7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.95□□□□□ -0.02
RSPO1Q2MKA7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO1Q2MKA7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO1Q2MKA7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RSPO1Q2MKA7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO1Q2MKA7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO1Q2MKA7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO1Q2MKA7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
RSPO1Q2MKA7 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO1Q2MKA7 AKR1C7P-201ENST00000305623 895 ntBASIC14.95□□□□□ -0.02
RSPO1Q2MKA7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO1Q2MKA7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO1Q2MKA7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.95□□□□□ -0.02
RSPO1Q2MKA7 FGFR3P6-201ENST00000457012 610 ntBASIC14.95□□□□□ -0.02
RSPO1Q2MKA7 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.95□□□□□ -0.02
RSPO1Q2MKA7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.95□□□□□ -0.02
RSPO1Q2MKA7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO1Q2MKA7 CLEC4GP1-201ENST00000596555 870 ntBASIC14.95□□□□□ -0.02
RSPO1Q2MKA7 REXO1L6P-202ENST00000619970 1078 ntBASIC14.95□□□□□ -0.02
RSPO1Q2MKA7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
RSPO1Q2MKA7 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
RSPO1Q2MKA7 AL356309.3-201ENST00000624132 1934 ntBASIC14.95□□□□□ -0.02
RSPO1Q2MKA7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO1Q2MKA7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO1Q2MKA7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO1Q2MKA7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.95□□□□□ -0.02
RSPO1Q2MKA7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO1Q2MKA7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.95□□□□□ -0.02
RSPO1Q2MKA7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.95□□□□□ -0.02
RSPO1Q2MKA7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 AL590787.1-201ENST00000568856 1315 ntBASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 UNC93B7-201ENST00000509439 705 ntBASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 AF238378.1-201ENST00000526806 358 ntBASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 SART3-203ENST00000546611 1184 ntBASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 DUX4L17-201ENST00000557360 1267 ntBASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 PRELID1P1-202ENST00000567272 903 ntBASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 AL353135.1-201ENST00000606729 504 ntBASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC14.94□□□□□ -0.02
RSPO1Q2MKA7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.93□□□□□ -0.02
RSPO1Q2MKA7 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.93□□□□□ -0.02
RSPO1Q2MKA7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO1Q2MKA7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO1Q2MKA7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO1Q2MKA7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.93□□□□□ -0.02
RSPO1Q2MKA7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO1Q2MKA7 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO1Q2MKA7 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RSPO1Q2MKA7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO1Q2MKA7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.93□□□□□ -0.02
RSPO1Q2MKA7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.93□□□□□ -0.02
RSPO1Q2MKA7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO1Q2MKA7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO1Q2MKA7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO1Q2MKA7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RSPO1Q2MKA7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.93□□□□□ -0.02
RSPO1Q2MKA7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.93□□□□□ -0.02
RSPO1Q2MKA7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO1Q2MKA7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.93□□□□□ -0.02
RSPO1Q2MKA7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO1Q2MKA7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO1Q2MKA7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
RSPO1Q2MKA7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RSPO1Q2MKA7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RSPO1Q2MKA7 AL022326.1-202ENST00000641533 845 ntBASIC14.93□□□□□ -0.02
RSPO1Q2MKA7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms