Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DEFA3P59666 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
DEFA3P59666 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
DEFA3P59666 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.2■□□□□ 0.02
DEFA3P59666 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.2■□□□□ 0.02
DEFA3P59666 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
DEFA3P59666 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DEFA3P59666 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DEFA3P59666 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DEFA3P59666 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DEFA3P59666 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
DEFA3P59666 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DEFA3P59666 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DEFA3P59666 MTHFR-217ENST00000641820 1569 ntBASIC15.19■□□□□ 0.02
DEFA3P59666 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.19■□□□□ 0.02
DEFA3P59666 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
DEFA3P59666 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
DEFA3P59666 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DEFA3P59666 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DEFA3P59666 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
DEFA3P59666 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.19■□□□□ 0.02
DEFA3P59666 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
DEFA3P59666 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC15.19■□□□□ 0.02
DEFA3P59666 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
DEFA3P59666 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.19■□□□□ 0.02
DEFA3P59666 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.19■□□□□ 0.02
DEFA3P59666 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.19■□□□□ 0.02
DEFA3P59666 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DEFA3P59666 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
DEFA3P59666 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DEFA3P59666 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC15.19■□□□□ 0.02
DEFA3P59666 C1QL1P1-201ENST00000568105 661 ntBASIC15.19■□□□□ 0.02
DEFA3P59666 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
DEFA3P59666 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
DEFA3P59666 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.19■□□□□ 0.02
DEFA3P59666 AC022532.1-201ENST00000624563 1728 ntBASIC15.19■□□□□ 0.02
DEFA3P59666 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DEFA3P59666 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
DEFA3P59666 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.19■□□□□ 0.02
DEFA3P59666 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
DEFA3P59666 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
DEFA3P59666 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DEFA3P59666 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.19■□□□□ 0.02
DEFA3P59666 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.19■□□□□ 0.02
DEFA3P59666 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
DEFA3P59666 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.19■□□□□ 0.02
DEFA3P59666 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DEFA3P59666 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
DEFA3P59666 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DEFA3P59666 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DEFA3P59666 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DEFA3P59666 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DEFA3P59666 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DEFA3P59666 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DEFA3P59666 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
DEFA3P59666 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DEFA3P59666 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
DEFA3P59666 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
DEFA3P59666 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
DEFA3P59666 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.18■□□□□ 0.02
DEFA3P59666 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
DEFA3P59666 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DEFA3P59666 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
DEFA3P59666 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
DEFA3P59666 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
DEFA3P59666 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
DEFA3P59666 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.18■□□□□ 0.02
DEFA3P59666 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
DEFA3P59666 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
DEFA3P59666 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
DEFA3P59666 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
DEFA3P59666 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DEFA3P59666 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.18■□□□□ 0.02
DEFA3P59666 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.18■□□□□ 0.02
DEFA3P59666 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC15.18■□□□□ 0.02
DEFA3P59666 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC15.18■□□□□ 0.02
DEFA3P59666 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC15.18■□□□□ 0.02
DEFA3P59666 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC15.18■□□□□ 0.02
DEFA3P59666 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC15.18■□□□□ 0.02
DEFA3P59666 Z85996.1-201ENST00000494644 937 ntBASIC15.18■□□□□ 0.02
DEFA3P59666 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.18■□□□□ 0.02
DEFA3P59666 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC15.18■□□□□ 0.02
DEFA3P59666 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
DEFA3P59666 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC15.18■□□□□ 0.02
DEFA3P59666 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.18■□□□□ 0.02
DEFA3P59666 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
DEFA3P59666 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
DEFA3P59666 AC006538.1-201ENST00000567905 1585 ntBASIC15.18■□□□□ 0.02
DEFA3P59666 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DEFA3P59666 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DEFA3P59666 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
DEFA3P59666 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
DEFA3P59666 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DEFA3P59666 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DEFA3P59666 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DEFA3P59666 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
DEFA3P59666 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DEFA3P59666 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
DEFA3P59666 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DEFA3P59666 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms