Protein–RNA interactions for Protein: P55822

SH3BGR, SH3 domain-binding glutamic acid-rich protein, humanhuman

Predicted RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BGRP55822 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SH3BGRP55822 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SH3BGRP55822 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SH3BGRP55822 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.58■□□□□ 0.24
SH3BGRP55822 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SH3BGRP55822 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.58■□□□□ 0.24
SH3BGRP55822 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SH3BGRP55822 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SH3BGRP55822 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.58■□□□□ 0.24
SH3BGRP55822 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.58■□□□□ 0.24
SH3BGRP55822 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.58■□□□□ 0.24
SH3BGRP55822 AC133561.5-201ENST00000635547 218 ntBASIC16.58■□□□□ 0.24
SH3BGRP55822 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.58■□□□□ 0.24
SH3BGRP55822 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SH3BGRP55822 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.58■□□□□ 0.24
SH3BGRP55822 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
SH3BGRP55822 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SH3BGRP55822 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.58■□□□□ 0.24
SH3BGRP55822 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SH3BGRP55822 AC008556.1-201ENST00000610908 2040 ntBASIC16.58■□□□□ 0.24
SH3BGRP55822 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SH3BGRP55822 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SH3BGRP55822 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SH3BGRP55822 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SH3BGRP55822 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SH3BGRP55822 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.58■□□□□ 0.24
SH3BGRP55822 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SH3BGRP55822 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SH3BGRP55822 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SH3BGRP55822 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SH3BGRP55822 AL499627.1-201ENST00000569373 2188 ntBASIC16.57■□□□□ 0.24
SH3BGRP55822 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.57■□□□□ 0.24
SH3BGRP55822 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
SH3BGRP55822 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SH3BGRP55822 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SH3BGRP55822 HMGA1P5-201ENST00000412453 271 ntBASIC16.57■□□□□ 0.24
SH3BGRP55822 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.57■□□□□ 0.24
SH3BGRP55822 AC007663.1-201ENST00000438948 1240 ntBASIC16.57■□□□□ 0.24
SH3BGRP55822 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.57■□□□□ 0.24
SH3BGRP55822 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.57■□□□□ 0.24
SH3BGRP55822 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.57■□□□□ 0.24
SH3BGRP55822 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.57■□□□□ 0.24
SH3BGRP55822 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.57■□□□□ 0.24
SH3BGRP55822 AC012306.2-201ENST00000609350 630 ntBASIC16.57■□□□□ 0.24
SH3BGRP55822 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
SH3BGRP55822 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SH3BGRP55822 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SH3BGRP55822 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SH3BGRP55822 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.57■□□□□ 0.24
SH3BGRP55822 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SH3BGRP55822 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SH3BGRP55822 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.57■□□□□ 0.24
SH3BGRP55822 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SH3BGRP55822 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SH3BGRP55822 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.57■□□□□ 0.24
SH3BGRP55822 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.57■□□□□ 0.24
SH3BGRP55822 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.57■□□□□ 0.24
SH3BGRP55822 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH3BGRP55822 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH3BGRP55822 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SH3BGRP55822 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH3BGRP55822 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH3BGRP55822 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.56■□□□□ 0.24
SH3BGRP55822 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH3BGRP55822 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH3BGRP55822 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.56■□□□□ 0.24
SH3BGRP55822 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SH3BGRP55822 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH3BGRP55822 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.56■□□□□ 0.24
SH3BGRP55822 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.56■□□□□ 0.24
SH3BGRP55822 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.56■□□□□ 0.24
SH3BGRP55822 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.56■□□□□ 0.24
SH3BGRP55822 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SH3BGRP55822 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
SH3BGRP55822 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH3BGRP55822 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH3BGRP55822 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SH3BGRP55822 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
SH3BGRP55822 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SH3BGRP55822 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH3BGRP55822 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.56■□□□□ 0.24
SH3BGRP55822 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.56■□□□□ 0.24
SH3BGRP55822 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.56■□□□□ 0.24
SH3BGRP55822 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.56■□□□□ 0.24
SH3BGRP55822 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH3BGRP55822 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH3BGRP55822 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH3BGRP55822 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.56■□□□□ 0.24
SH3BGRP55822 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH3BGRP55822 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC16.56■□□□□ 0.24
SH3BGRP55822 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SH3BGRP55822 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SH3BGRP55822 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.56■□□□□ 0.24
SH3BGRP55822 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
SH3BGRP55822 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SH3BGRP55822 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SH3BGRP55822 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.56■□□□□ 0.24
SH3BGRP55822 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SH3BGRP55822 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH3BGRP55822 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms