Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCLP19338 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
NCLP19338 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC20.65■□□□□ 0.9
NCLP19338 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
NCLP19338 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCLP19338 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCLP19338 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
NCLP19338 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NCLP19338 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NCLP19338 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NCLP19338 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.64■□□□□ 0.9
NCLP19338 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCLP19338 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.64■□□□□ 0.89
NCLP19338 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
NCLP19338 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NCLP19338 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCLP19338 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCLP19338 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.64■□□□□ 0.89
NCLP19338 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.64■□□□□ 0.89
NCLP19338 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCLP19338 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.64■□□□□ 0.89
NCLP19338 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.64■□□□□ 0.89
NCLP19338 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.64■□□□□ 0.89
NCLP19338 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.64■□□□□ 0.89
NCLP19338 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCLP19338 AC116407.2-201ENST00000613639 860 ntBASIC20.64■□□□□ 0.89
NCLP19338 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCLP19338 AL023973.1-201ENST00000624619 620 ntBASIC20.64■□□□□ 0.89
NCLP19338 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCLP19338 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.64■□□□□ 0.89
NCLP19338 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCLP19338 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCLP19338 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
NCLP19338 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC20.64■□□□□ 0.89
NCLP19338 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.64■□□□□ 0.89
NCLP19338 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCLP19338 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
NCLP19338 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
NCLP19338 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
NCLP19338 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NCLP19338 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCLP19338 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.63■□□□□ 0.89
NCLP19338 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NCLP19338 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NCLP19338 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC20.63■□□□□ 0.89
NCLP19338 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.63■□□□□ 0.89
NCLP19338 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.63■□□□□ 0.89
NCLP19338 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NCLP19338 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
NCLP19338 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.63■□□□□ 0.89
NCLP19338 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
NCLP19338 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
NCLP19338 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
NCLP19338 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NCLP19338 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
NCLP19338 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
NCLP19338 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NCLP19338 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NCLP19338 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NCLP19338 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.63■□□□□ 0.89
NCLP19338 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NCLP19338 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.63■□□□□ 0.89
NCLP19338 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.63■□□□□ 0.89
NCLP19338 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.63■□□□□ 0.89
NCLP19338 AL441883.1-201ENST00000566170 1045 ntBASIC20.63■□□□□ 0.89
NCLP19338 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NCLP19338 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.63■□□□□ 0.89
NCLP19338 AC140113.3-201ENST00000605663 199 ntBASIC20.63■□□□□ 0.89
NCLP19338 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
NCLP19338 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NCLP19338 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NCLP19338 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NCLP19338 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NCLP19338 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC20.63■□□□□ 0.89
NCLP19338 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
NCLP19338 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NCLP19338 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
NCLP19338 TSPY26P-202ENST00000565928 3884 ntBASIC20.63■□□□□ 0.89
NCLP19338 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NCLP19338 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
NCLP19338 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
NCLP19338 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
NCLP19338 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NCLP19338 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCLP19338 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCLP19338 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.62■□□□□ 0.89
NCLP19338 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
NCLP19338 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
NCLP19338 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCLP19338 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.62■□□□□ 0.89
NCLP19338 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.62■□□□□ 0.89
NCLP19338 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.62■□□□□ 0.89
NCLP19338 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.62■□□□□ 0.89
NCLP19338 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCLP19338 HOMER2P1-201ENST00000455653 964 ntBASIC20.62■□□□□ 0.89
NCLP19338 AC092647.4-201ENST00000457211 535 ntBASIC20.62■□□□□ 0.89
NCLP19338 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.62■□□□□ 0.89
NCLP19338 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.62■□□□□ 0.89
NCLP19338 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
NCLP19338 AC068587.6-202ENST00000641839 5619 ntBASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms