Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TPM3P06753 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TPM3P06753 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.44■□□□□ 0.7
TPM3P06753 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
TPM3P06753 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPM3P06753 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPM3P06753 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TPM3P06753 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPM3P06753 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19.44■□□□□ 0.7
TPM3P06753 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPM3P06753 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPM3P06753 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.44■□□□□ 0.7
TPM3P06753 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TPM3P06753 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.44■□□□□ 0.7
TPM3P06753 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPM3P06753 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.44■□□□□ 0.7
TPM3P06753 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TPM3P06753 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPM3P06753 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TPM3P06753 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TPM3P06753 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.44■□□□□ 0.7
TPM3P06753 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.44■□□□□ 0.7
TPM3P06753 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TPM3P06753 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPM3P06753 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPM3P06753 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPM3P06753 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
TPM3P06753 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPM3P06753 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPM3P06753 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPM3P06753 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TPM3P06753 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TPM3P06753 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPM3P06753 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
TPM3P06753 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TPM3P06753 LINC01311-201ENST00000565162 1445 ntBASIC19.43■□□□□ 0.7
TPM3P06753 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.43■□□□□ 0.7
TPM3P06753 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
TPM3P06753 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
TPM3P06753 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TPM3P06753 KRT89P-201ENST00000620027 1478 ntBASIC19.43■□□□□ 0.7
TPM3P06753 AC078925.2-201ENST00000624013 1973 ntBASIC19.43■□□□□ 0.7
TPM3P06753 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TPM3P06753 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.43■□□□□ 0.7
TPM3P06753 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.43■□□□□ 0.7
TPM3P06753 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.43■□□□□ 0.7
TPM3P06753 PRORSD1P-201ENST00000295112 541 ntBASIC19.43■□□□□ 0.7
TPM3P06753 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.43■□□□□ 0.7
TPM3P06753 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TPM3P06753 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TPM3P06753 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.43■□□□□ 0.7
TPM3P06753 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TPM3P06753 MIR1238-201ENST00000408483 83 ntBASIC19.43■□□□□ 0.7
TPM3P06753 AC005104.2-201ENST00000427818 678 ntBASIC19.43■□□□□ 0.7
TPM3P06753 AL390955.1-201ENST00000428694 934 ntBASIC19.43■□□□□ 0.7
TPM3P06753 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.43■□□□□ 0.7
TPM3P06753 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.43■□□□□ 0.7
TPM3P06753 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
TPM3P06753 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.43■□□□□ 0.7
TPM3P06753 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.43■□□□□ 0.7
TPM3P06753 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.43■□□□□ 0.7
TPM3P06753 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.43■□□□□ 0.7
TPM3P06753 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TPM3P06753 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.43■□□□□ 0.7
TPM3P06753 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TPM3P06753 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TPM3P06753 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TPM3P06753 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TPM3P06753 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC19.43■□□□□ 0.7
TPM3P06753 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TPM3P06753 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TPM3P06753 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.42■□□□□ 0.7
TPM3P06753 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TPM3P06753 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TPM3P06753 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.42■□□□□ 0.7
TPM3P06753 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.42■□□□□ 0.7
TPM3P06753 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TPM3P06753 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
TPM3P06753 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TPM3P06753 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.42■□□□□ 0.7
TPM3P06753 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TPM3P06753 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
TPM3P06753 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TPM3P06753 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.42■□□□□ 0.7
TPM3P06753 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.42■□□□□ 0.7
TPM3P06753 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TPM3P06753 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TPM3P06753 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC19.42■□□□□ 0.7
TPM3P06753 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
TPM3P06753 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TPM3P06753 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.42■□□□□ 0.7
TPM3P06753 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TPM3P06753 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TPM3P06753 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TPM3P06753 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.42■□□□□ 0.7
TPM3P06753 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC19.42■□□□□ 0.7
TPM3P06753 AC105917.1-201ENST00000506637 2539 ntBASIC19.42■□□□□ 0.7
TPM3P06753 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TPM3P06753 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TPM3P06753 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms