Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.82□□□□□ -0.04
TMEM235A6NFC5 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TMEM235A6NFC5 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM235A6NFC5 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM235A6NFC5 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.82□□□□□ -0.04
TMEM235A6NFC5 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM235A6NFC5 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TMEM235A6NFC5 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM235A6NFC5 TSPY12P-201ENST00000421279 868 ntBASIC14.82□□□□□ -0.04
TMEM235A6NFC5 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM235A6NFC5 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM235A6NFC5 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC14.82□□□□□ -0.04
TMEM235A6NFC5 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC14.82□□□□□ -0.04
TMEM235A6NFC5 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM235A6NFC5 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC14.82□□□□□ -0.04
TMEM235A6NFC5 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM235A6NFC5 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TMEM235A6NFC5 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14.82□□□□□ -0.04
TMEM235A6NFC5 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM235A6NFC5 AC004263.2-201ENST00000617183 678 ntBASIC14.82□□□□□ -0.04
TMEM235A6NFC5 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM235A6NFC5 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM235A6NFC5 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM235A6NFC5 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM235A6NFC5 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM235A6NFC5 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM235A6NFC5 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM235A6NFC5 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.82□□□□□ -0.04
TMEM235A6NFC5 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.82□□□□□ -0.04
TMEM235A6NFC5 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM235A6NFC5 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.82□□□□□ -0.04
TMEM235A6NFC5 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.82□□□□□ -0.04
TMEM235A6NFC5 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM235A6NFC5 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM235A6NFC5 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM235A6NFC5 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM235A6NFC5 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.82□□□□□ -0.04
TMEM235A6NFC5 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TMEM235A6NFC5 AC026691.1-201ENST00000602502 2017 ntBASIC14.82□□□□□ -0.04
TMEM235A6NFC5 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 AL513477.1-201ENST00000602865 2407 ntBASIC14.81□□□□□ -0.04
TMEM235A6NFC5 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 AC068418.2-201ENST00000577309 3703 ntBASIC14.81□□□□□ -0.04
TMEM235A6NFC5 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 AL356309.3-201ENST00000624132 1934 ntBASIC14.81□□□□□ -0.04
TMEM235A6NFC5 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TMEM235A6NFC5 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM235A6NFC5 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.8□□□□□ -0.04
TMEM235A6NFC5 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms