Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CTAGE9A4FU28 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.52■□□□□ 0.56
CTAGE9A4FU28 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CTAGE9A4FU28 AC009947.2-201ENST00000444014 672 ntBASIC18.52■□□□□ 0.56
CTAGE9A4FU28 AC112698.1-201ENST00000510299 916 ntBASIC18.52■□□□□ 0.56
CTAGE9A4FU28 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.52■□□□□ 0.56
CTAGE9A4FU28 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CTAGE9A4FU28 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CTAGE9A4FU28 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTAGE9A4FU28 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CTAGE9A4FU28 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTAGE9A4FU28 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.52■□□□□ 0.56
CTAGE9A4FU28 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.52■□□□□ 0.55
CTAGE9A4FU28 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
CTAGE9A4FU28 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.52■□□□□ 0.55
CTAGE9A4FU28 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CTAGE9A4FU28 AC132872.4-202ENST00000622924 2756 ntBASIC18.52■□□□□ 0.55
CTAGE9A4FU28 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CTAGE9A4FU28 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.52■□□□□ 0.55
CTAGE9A4FU28 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CTAGE9A4FU28 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.51■□□□□ 0.55
CTAGE9A4FU28 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CTAGE9A4FU28 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.51■□□□□ 0.55
CTAGE9A4FU28 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTAGE9A4FU28 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CTAGE9A4FU28 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTAGE9A4FU28 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTAGE9A4FU28 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.51■□□□□ 0.55
CTAGE9A4FU28 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.51■□□□□ 0.55
CTAGE9A4FU28 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTAGE9A4FU28 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTAGE9A4FU28 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.51■□□□□ 0.55
CTAGE9A4FU28 SNORA78-201ENST00000459373 127 ntBASIC18.51■□□□□ 0.55
CTAGE9A4FU28 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CTAGE9A4FU28 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
CTAGE9A4FU28 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTAGE9A4FU28 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.51■□□□□ 0.55
CTAGE9A4FU28 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.51■□□□□ 0.55
CTAGE9A4FU28 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.51■□□□□ 0.55
CTAGE9A4FU28 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.51■□□□□ 0.55
CTAGE9A4FU28 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.51■□□□□ 0.55
CTAGE9A4FU28 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTAGE9A4FU28 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.51■□□□□ 0.55
CTAGE9A4FU28 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.51■□□□□ 0.55
CTAGE9A4FU28 AP000525.1-201ENST00000608286 694 ntBASIC18.51■□□□□ 0.55
CTAGE9A4FU28 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.51■□□□□ 0.55
CTAGE9A4FU28 AC009154.2-201ENST00000621177 724 ntBASIC18.51■□□□□ 0.55
CTAGE9A4FU28 AL157888.1-201ENST00000631930 593 ntBASIC18.51■□□□□ 0.55
CTAGE9A4FU28 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.51■□□□□ 0.55
CTAGE9A4FU28 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTAGE9A4FU28 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CTAGE9A4FU28 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTAGE9A4FU28 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.51■□□□□ 0.55
CTAGE9A4FU28 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTAGE9A4FU28 KRT89P-201ENST00000620027 1478 ntBASIC18.51■□□□□ 0.55
CTAGE9A4FU28 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CTAGE9A4FU28 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTAGE9A4FU28 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTAGE9A4FU28 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTAGE9A4FU28 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.5■□□□□ 0.55
CTAGE9A4FU28 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTAGE9A4FU28 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTAGE9A4FU28 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTAGE9A4FU28 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CTAGE9A4FU28 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CTAGE9A4FU28 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CTAGE9A4FU28 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTAGE9A4FU28 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTAGE9A4FU28 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.5■□□□□ 0.55
CTAGE9A4FU28 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTAGE9A4FU28 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.5■□□□□ 0.55
CTAGE9A4FU28 AC002558.1-201ENST00000488906 803 ntBASIC18.5■□□□□ 0.55
CTAGE9A4FU28 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTAGE9A4FU28 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CTAGE9A4FU28 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTAGE9A4FU28 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CTAGE9A4FU28 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTAGE9A4FU28 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTAGE9A4FU28 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTAGE9A4FU28 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTAGE9A4FU28 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.5■□□□□ 0.55
CTAGE9A4FU28 KRT17P2-201ENST00000300992 1314 ntBASIC18.49■□□□□ 0.55
CTAGE9A4FU28 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTAGE9A4FU28 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms