Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LRCH1Q9Y2L9 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.52■□□□□ 0.23
LRCH1Q9Y2L9 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
LRCH1Q9Y2L9 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 AL135905.2-201ENST00000584934 1404 ntBASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 NFIC-211ENST00000641145 8399 ntBASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.51■□□□□ 0.23
LRCH1Q9Y2L9 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 MIR564-202ENST00000385049 94 ntBASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRCH1Q9Y2L9 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.49■□□□□ 0.23
LRCH1Q9Y2L9 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.49■□□□□ 0.23
LRCH1Q9Y2L9 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.49■□□□□ 0.23
LRCH1Q9Y2L9 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
LRCH1Q9Y2L9 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.49■□□□□ 0.23
LRCH1Q9Y2L9 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.49■□□□□ 0.23
LRCH1Q9Y2L9 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH1Q9Y2L9 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH1Q9Y2L9 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH1Q9Y2L9 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.49■□□□□ 0.23
LRCH1Q9Y2L9 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH1Q9Y2L9 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH1Q9Y2L9 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH1Q9Y2L9 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.49■□□□□ 0.23
LRCH1Q9Y2L9 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH1Q9Y2L9 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH1Q9Y2L9 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRCH1Q9Y2L9 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms