Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.93■□□□□ 0.46
HPS4Q9NQG7 AL355385.1-201ENST00000606123 409 ntBASIC17.93■□□□□ 0.46
HPS4Q9NQG7 AL596442.2-201ENST00000610240 980 ntBASIC17.93■□□□□ 0.46
HPS4Q9NQG7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HPS4Q9NQG7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
HPS4Q9NQG7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.93■□□□□ 0.46
HPS4Q9NQG7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
HPS4Q9NQG7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HPS4Q9NQG7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HPS4Q9NQG7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HPS4Q9NQG7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HPS4Q9NQG7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HPS4Q9NQG7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HPS4Q9NQG7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HPS4Q9NQG7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HPS4Q9NQG7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.93■□□□□ 0.46
HPS4Q9NQG7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 FZD10-202ENST00000539839 3282 ntBASIC17.92■□□□□ 0.46
HPS4Q9NQG7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 LINC00982-205ENST00000420957 435 ntBASIC17.92■□□□□ 0.46
HPS4Q9NQG7 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 AC002558.1-201ENST00000488906 803 ntBASIC17.92■□□□□ 0.46
HPS4Q9NQG7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 AC010654.1-201ENST00000615722 808 ntBASIC17.92■□□□□ 0.46
HPS4Q9NQG7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.92■□□□□ 0.46
HPS4Q9NQG7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HPS4Q9NQG7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPS4Q9NQG7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.91■□□□□ 0.46
HPS4Q9NQG7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.91■□□□□ 0.46
HPS4Q9NQG7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPS4Q9NQG7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
HPS4Q9NQG7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
HPS4Q9NQG7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPS4Q9NQG7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPS4Q9NQG7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
HPS4Q9NQG7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
HPS4Q9NQG7 AC068880.1-201ENST00000507289 2297 ntBASIC17.91■□□□□ 0.46
HPS4Q9NQG7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HPS4Q9NQG7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPS4Q9NQG7 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPS4Q9NQG7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPS4Q9NQG7 MRPL20P1-201ENST00000400819 433 ntBASIC17.91■□□□□ 0.46
HPS4Q9NQG7 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.91■□□□□ 0.46
HPS4Q9NQG7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.91■□□□□ 0.46
HPS4Q9NQG7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.91■□□□□ 0.46
HPS4Q9NQG7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.91■□□□□ 0.46
HPS4Q9NQG7 OR7E47P-204ENST00000575924 449 ntBASIC17.91■□□□□ 0.46
HPS4Q9NQG7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.91■□□□□ 0.46
HPS4Q9NQG7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.91■□□□□ 0.46
HPS4Q9NQG7 C20orf181-201ENST00000623918 480 ntBASIC17.91■□□□□ 0.46
HPS4Q9NQG7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
HPS4Q9NQG7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HPS4Q9NQG7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPS4Q9NQG7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
HPS4Q9NQG7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPS4Q9NQG7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.91■□□□□ 0.46
HPS4Q9NQG7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPS4Q9NQG7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HPS4Q9NQG7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPS4Q9NQG7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HPS4Q9NQG7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
HPS4Q9NQG7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
HPS4Q9NQG7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.91■□□□□ 0.46
HPS4Q9NQG7 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
HPS4Q9NQG7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms