Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 PTENP1-202ENST00000532280 3996 ntBASIC20.53■□□□□ 0.88
RTN4Q9NQC3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTN4Q9NQC3 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTN4Q9NQC3 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.52■□□□□ 0.88
RTN4Q9NQC3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RTN4Q9NQC3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.52■□□□□ 0.88
RTN4Q9NQC3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTN4Q9NQC3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTN4Q9NQC3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.52■□□□□ 0.88
RTN4Q9NQC3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RTN4Q9NQC3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.52■□□□□ 0.88
RTN4Q9NQC3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.52■□□□□ 0.88
RTN4Q9NQC3 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RTN4Q9NQC3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
RTN4Q9NQC3 AL023875.1-201ENST00000640777 796 ntBASIC20.52■□□□□ 0.88
RTN4Q9NQC3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.52■□□□□ 0.88
RTN4Q9NQC3 AC106881.1-201ENST00000605849 3329 ntBASIC20.52■□□□□ 0.88
RTN4Q9NQC3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTN4Q9NQC3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTN4Q9NQC3 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC20.52■□□□□ 0.88
RTN4Q9NQC3 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTN4Q9NQC3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC20.52■□□□□ 0.88
RTN4Q9NQC3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTN4Q9NQC3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTN4Q9NQC3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC20.52■□□□□ 0.88
RTN4Q9NQC3 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
RTN4Q9NQC3 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RTN4Q9NQC3 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
RTN4Q9NQC3 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4Q9NQC3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RTN4Q9NQC3 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4Q9NQC3 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4Q9NQC3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4Q9NQC3 AL357033.4-201ENST00000617703 1807 ntBASIC20.51■□□□□ 0.87
RTN4Q9NQC3 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4Q9NQC3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4Q9NQC3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC20.51■□□□□ 0.87
RTN4Q9NQC3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
RTN4Q9NQC3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4Q9NQC3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
RTN4Q9NQC3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4Q9NQC3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4Q9NQC3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4Q9NQC3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RTN4Q9NQC3 AC138035.3-201ENST00000622706 2791 ntBASIC20.51■□□□□ 0.87
RTN4Q9NQC3 AC026366.1-201ENST00000488803 879 ntBASIC20.51■□□□□ 0.87
RTN4Q9NQC3 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC20.51■□□□□ 0.87
RTN4Q9NQC3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.51■□□□□ 0.87
RTN4Q9NQC3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.51■□□□□ 0.87
RTN4Q9NQC3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4Q9NQC3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4Q9NQC3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4Q9NQC3 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4Q9NQC3 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4Q9NQC3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4Q9NQC3 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.51■□□□□ 0.87
RTN4Q9NQC3 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4Q9NQC3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4Q9NQC3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4Q9NQC3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4Q9NQC3 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4Q9NQC3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.51■□□□□ 0.87
RTN4Q9NQC3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4Q9NQC3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4Q9NQC3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 KRASP1-201ENST00000407852 552 ntBASIC20.5■□□□□ 0.87
RTN4Q9NQC3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 PRSS44-201ENST00000515154 1146 ntBASIC20.5■□□□□ 0.87
RTN4Q9NQC3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC20.5■□□□□ 0.87
RTN4Q9NQC3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms