Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
COMMD4Q9H0A8 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COMMD4Q9H0A8 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.34■□□□□ 0.05
COMMD4Q9H0A8 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COMMD4Q9H0A8 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
COMMD4Q9H0A8 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COMMD4Q9H0A8 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COMMD4Q9H0A8 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COMMD4Q9H0A8 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COMMD4Q9H0A8 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.34■□□□□ 0.05
COMMD4Q9H0A8 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COMMD4Q9H0A8 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.34■□□□□ 0.05
COMMD4Q9H0A8 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.33■□□□□ 0.05
COMMD4Q9H0A8 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
COMMD4Q9H0A8 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
COMMD4Q9H0A8 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
COMMD4Q9H0A8 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
COMMD4Q9H0A8 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
COMMD4Q9H0A8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
COMMD4Q9H0A8 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
COMMD4Q9H0A8 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
COMMD4Q9H0A8 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COMMD4Q9H0A8 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COMMD4Q9H0A8 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.33■□□□□ 0.04
COMMD4Q9H0A8 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COMMD4Q9H0A8 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
COMMD4Q9H0A8 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
COMMD4Q9H0A8 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COMMD4Q9H0A8 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COMMD4Q9H0A8 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
COMMD4Q9H0A8 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.33■□□□□ 0.04
COMMD4Q9H0A8 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.33■□□□□ 0.04
COMMD4Q9H0A8 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
COMMD4Q9H0A8 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.33■□□□□ 0.04
COMMD4Q9H0A8 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
COMMD4Q9H0A8 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
COMMD4Q9H0A8 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.33■□□□□ 0.04
COMMD4Q9H0A8 AL031432.5-201ENST00000641059 760 ntBASIC15.33■□□□□ 0.04
COMMD4Q9H0A8 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COMMD4Q9H0A8 UBALD1-205ENST00000590891 2641 ntBASIC15.33■□□□□ 0.04
COMMD4Q9H0A8 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COMMD4Q9H0A8 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COMMD4Q9H0A8 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COMMD4Q9H0A8 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
COMMD4Q9H0A8 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COMMD4Q9H0A8 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COMMD4Q9H0A8 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COMMD4Q9H0A8 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COMMD4Q9H0A8 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
COMMD4Q9H0A8 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COMMD4Q9H0A8 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
COMMD4Q9H0A8 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
COMMD4Q9H0A8 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.33■□□□□ 0.04
COMMD4Q9H0A8 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 AC046185.3-201ENST00000623228 1824 ntBASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 MTCL1P1-201ENST00000446207 792 ntBASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 AC079602.3-201ENST00000623931 403 ntBASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 AL023973.1-201ENST00000624619 620 ntBASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 PCDHB19P-201ENST00000570871 2371 ntBASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD4Q9H0A8 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.31■□□□□ 0.04
COMMD4Q9H0A8 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms