Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.92■□□□□ 0.94
EYA3Q99504 HARS-203ENST00000431330 1774 ntTSL 2 BASIC20.92■□□□□ 0.94
EYA3Q99504 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.92■□□□□ 0.94
EYA3Q99504 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
EYA3Q99504 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
EYA3Q99504 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.92■□□□□ 0.94
EYA3Q99504 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
EYA3Q99504 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EYA3Q99504 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EYA3Q99504 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EYA3Q99504 TFAMP1-201ENST00000412727 736 ntBASIC20.91■□□□□ 0.94
EYA3Q99504 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC20.91■□□□□ 0.94
EYA3Q99504 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
EYA3Q99504 AC079140.1-201ENST00000508039 487 ntBASIC20.91■□□□□ 0.94
EYA3Q99504 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC20.91■□□□□ 0.94
EYA3Q99504 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
EYA3Q99504 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.91■□□□□ 0.94
EYA3Q99504 TSFM-210ENST00000550559 897 ntTSL 5 BASIC20.91■□□□□ 0.94
EYA3Q99504 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC20.91■□□□□ 0.94
EYA3Q99504 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC20.91■□□□□ 0.94
EYA3Q99504 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC20.91■□□□□ 0.94
EYA3Q99504 Z92544.3-201ENST00000624747 417 ntBASIC20.91■□□□□ 0.94
EYA3Q99504 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC20.91■□□□□ 0.94
EYA3Q99504 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
EYA3Q99504 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
EYA3Q99504 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EYA3Q99504 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
EYA3Q99504 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
EYA3Q99504 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EYA3Q99504 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
EYA3Q99504 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.9■□□□□ 0.94
EYA3Q99504 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
EYA3Q99504 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EYA3Q99504 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
EYA3Q99504 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.9■□□□□ 0.94
EYA3Q99504 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
EYA3Q99504 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EYA3Q99504 AC020763.4-201ENST00000623414 4170 ntBASIC20.9■□□□□ 0.94
EYA3Q99504 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC20.9■□□□□ 0.94
EYA3Q99504 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
EYA3Q99504 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EYA3Q99504 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EYA3Q99504 CNN2P2-201ENST00000443536 909 ntBASIC20.9■□□□□ 0.94
EYA3Q99504 CNN2P3-201ENST00000450201 906 ntBASIC20.9■□□□□ 0.94
EYA3Q99504 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC20.9■□□□□ 0.94
EYA3Q99504 AC069335.1-201ENST00000489972 472 ntBASIC20.9■□□□□ 0.94
EYA3Q99504 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
EYA3Q99504 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC20.9■□□□□ 0.94
EYA3Q99504 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
EYA3Q99504 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC20.9■□□□□ 0.94
EYA3Q99504 MIR4745-201ENST00000577608 62 ntBASIC20.9■□□□□ 0.94
EYA3Q99504 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
EYA3Q99504 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
EYA3Q99504 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
EYA3Q99504 AL136317.3-201ENST00000618497 906 ntBASIC20.9■□□□□ 0.94
EYA3Q99504 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
EYA3Q99504 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC20.9■□□□□ 0.94
EYA3Q99504 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EYA3Q99504 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.9■□□□□ 0.94
EYA3Q99504 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
EYA3Q99504 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
EYA3Q99504 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
EYA3Q99504 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
EYA3Q99504 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.89■□□□□ 0.94
EYA3Q99504 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.89■□□□□ 0.94
EYA3Q99504 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
EYA3Q99504 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.89■□□□□ 0.94
EYA3Q99504 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
EYA3Q99504 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
EYA3Q99504 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.89■□□□□ 0.94
EYA3Q99504 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
EYA3Q99504 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
EYA3Q99504 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
EYA3Q99504 AKAP8P1-201ENST00000434743 1349 ntBASIC20.89■□□□□ 0.93
EYA3Q99504 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
EYA3Q99504 KRT18P32-201ENST00000424695 1287 ntBASIC20.89■□□□□ 0.93
EYA3Q99504 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
EYA3Q99504 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
EYA3Q99504 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC20.89■□□□□ 0.93
EYA3Q99504 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC20.89■□□□□ 0.93
EYA3Q99504 VPS29-207ENST00000549970 818 ntTSL 3 BASIC20.89■□□□□ 0.93
EYA3Q99504 RARRES2P8-201ENST00000566335 367 ntBASIC20.89■□□□□ 0.93
EYA3Q99504 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC20.89■□□□□ 0.93
EYA3Q99504 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.89■□□□□ 0.93
EYA3Q99504 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
EYA3Q99504 AC138028.4-201ENST00000564984 1845 ntBASIC20.89■□□□□ 0.93
EYA3Q99504 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.89■□□□□ 0.93
EYA3Q99504 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
EYA3Q99504 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
EYA3Q99504 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.89■□□□□ 0.93
EYA3Q99504 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
EYA3Q99504 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.89■□□□□ 0.93
EYA3Q99504 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EYA3Q99504 BICD1-207ENST00000551848 1962 ntBASIC20.88■□□□□ 0.93
EYA3Q99504 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EYA3Q99504 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EYA3Q99504 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EYA3Q99504 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EYA3Q99504 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
EYA3Q99504 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms