Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.18■□□□□ 0.18
MS4A4EQ96PG1 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 EGFEM1P-202ENST00000431685 1563 ntBASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 OR6D1P-203ENST00000641209 4860 ntBASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 AL020989.1-201ENST00000422979 469 ntBASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 ABCD1P5-201ENST00000445663 754 ntBASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 KRT16P4-201ENST00000453883 522 ntBASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 AL591684.3-201ENST00000605187 298 ntBASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
MS4A4EQ96PG1 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 SIGLEC30P-201ENST00000455569 941 ntBASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MS4A4EQ96PG1 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms