Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 POR-209ENST00000439269 1858 ntTSL 2 BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 RER1-203ENST00000378513 3000 ntTSL 3 BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 FEM1AP3-201ENST00000403722 1741 ntBASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 IGHV3-19-201ENST00000521488 291 ntBASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 AL359183.1-201ENST00000623796 2132 ntBASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 AC118758.2-201ENST00000614242 2813 ntBASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 AL359258.3-201ENST00000622910 2331 ntBASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 TENM3-204ENST00000511685 10896 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 AC007191.1-201ENST00000623179 2995 ntBASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SPTSSBQ8NFR3 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
SPTSSBQ8NFR3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SPTSSBQ8NFR3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC9.5□□□□□ -0.89
SPTSSBQ8NFR3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
SPTSSBQ8NFR3 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
SPTSSBQ8NFR3 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC9.5□□□□□ -0.89
SPTSSBQ8NFR3 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC9.5□□□□□ -0.89
SPTSSBQ8NFR3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
SPTSSBQ8NFR3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SPTSSBQ8NFR3 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SPTSSBQ8NFR3 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SPTSSBQ8NFR3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SPTSSBQ8NFR3 ZFHX2-202ENST00000419474 9182 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
SPTSSBQ8NFR3 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
SPTSSBQ8NFR3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC9.5□□□□□ -0.89
SPTSSBQ8NFR3 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
SPTSSBQ8NFR3 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC9.5□□□□□ -0.89
SPTSSBQ8NFR3 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
SPTSSBQ8NFR3 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SPTSSBQ8NFR3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SPTSSBQ8NFR3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC9.5□□□□□ -0.89
SPTSSBQ8NFR3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC9.5□□□□□ -0.89
SPTSSBQ8NFR3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
SPTSSBQ8NFR3 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SPTSSBQ8NFR3 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SPTSSBQ8NFR3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
SPTSSBQ8NFR3 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SPTSSBQ8NFR3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
SPTSSBQ8NFR3 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SPTSSBQ8NFR3 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC9.5□□□□□ -0.89
SPTSSBQ8NFR3 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC9.5□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms