Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
ZNF546Q86UE3 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.46□□□□□ -0.1
ZNF546Q86UE3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
ZNF546Q86UE3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
ZNF546Q86UE3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
ZNF546Q86UE3 AC132938.6-201ENST00000623828 1655 ntBASIC14.46□□□□□ -0.1
ZNF546Q86UE3 AC009949.1-201ENST00000623048 1830 ntBASIC14.45□□□□□ -0.1
ZNF546Q86UE3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 AC099063.4-201ENST00000641099 1602 ntBASIC14.45□□□□□ -0.1
ZNF546Q86UE3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 AC069544.1-201ENST00000609399 999 ntBASIC14.45□□□□□ -0.1
ZNF546Q86UE3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.45□□□□□ -0.1
ZNF546Q86UE3 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 KRASP1-201ENST00000407852 552 ntBASIC14.44□□□□□ -0.1
ZNF546Q86UE3 AC004951.3-201ENST00000418645 1148 ntBASIC14.44□□□□□ -0.1
ZNF546Q86UE3 NIFKP9-201ENST00000419265 221 ntBASIC14.44□□□□□ -0.1
ZNF546Q86UE3 AC004980.1-204ENST00000429707 299 ntBASIC14.44□□□□□ -0.1
ZNF546Q86UE3 MAP2K4P1-201ENST00000438453 1195 ntBASIC14.44□□□□□ -0.1
ZNF546Q86UE3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 AP003097.1-201ENST00000530657 1135 ntBASIC14.44□□□□□ -0.1
ZNF546Q86UE3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF546Q86UE3 AL024508.2-201ENST00000607749 1894 ntBASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms