Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP45Q70EL2 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP45Q70EL2 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP45Q70EL2 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP45Q70EL2 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.36■□□□□ 0.37
USP45Q70EL2 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.36■□□□□ 0.37
USP45Q70EL2 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.36■□□□□ 0.37
USP45Q70EL2 AC079776.4-201ENST00000511039 504 ntBASIC17.36■□□□□ 0.37
USP45Q70EL2 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP45Q70EL2 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP45Q70EL2 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.36■□□□□ 0.37
USP45Q70EL2 AC105339.3-201ENST00000560043 636 ntBASIC17.36■□□□□ 0.37
USP45Q70EL2 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.36■□□□□ 0.37
USP45Q70EL2 MIR7706-201ENST00000613747 67 ntBASIC17.36■□□□□ 0.37
USP45Q70EL2 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
USP45Q70EL2 MIR1199-201ENST00000621445 119 ntBASIC17.36■□□□□ 0.37
USP45Q70EL2 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP45Q70EL2 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP45Q70EL2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
USP45Q70EL2 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP45Q70EL2 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP45Q70EL2 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP45Q70EL2 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP45Q70EL2 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP45Q70EL2 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.36■□□□□ 0.37
USP45Q70EL2 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP45Q70EL2 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP45Q70EL2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
USP45Q70EL2 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.35■□□□□ 0.37
USP45Q70EL2 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP45Q70EL2 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP45Q70EL2 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.35■□□□□ 0.37
USP45Q70EL2 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
USP45Q70EL2 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP45Q70EL2 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP45Q70EL2 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
USP45Q70EL2 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
USP45Q70EL2 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
USP45Q70EL2 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP45Q70EL2 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP45Q70EL2 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.35■□□□□ 0.37
USP45Q70EL2 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.35■□□□□ 0.37
USP45Q70EL2 RNA5SP419-201ENST00000515908 135 ntBASIC17.35■□□□□ 0.37
USP45Q70EL2 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
USP45Q70EL2 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.35■□□□□ 0.37
USP45Q70EL2 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.35■□□□□ 0.37
USP45Q70EL2 AL353135.1-201ENST00000606729 504 ntBASIC17.35■□□□□ 0.37
USP45Q70EL2 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.35■□□□□ 0.37
USP45Q70EL2 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.35■□□□□ 0.37
USP45Q70EL2 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.35■□□□□ 0.37
USP45Q70EL2 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP45Q70EL2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.35■□□□□ 0.37
USP45Q70EL2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.35■□□□□ 0.37
USP45Q70EL2 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.35■□□□□ 0.37
USP45Q70EL2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
USP45Q70EL2 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP45Q70EL2 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP45Q70EL2 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
USP45Q70EL2 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
USP45Q70EL2 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP45Q70EL2 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
USP45Q70EL2 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
USP45Q70EL2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP45Q70EL2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.35■□□□□ 0.37
USP45Q70EL2 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP45Q70EL2 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP45Q70EL2 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
USP45Q70EL2 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP45Q70EL2 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
USP45Q70EL2 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
USP45Q70EL2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP45Q70EL2 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP45Q70EL2 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP45Q70EL2 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USP45Q70EL2 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP45Q70EL2 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP45Q70EL2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.34■□□□□ 0.37
USP45Q70EL2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP45Q70EL2 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP45Q70EL2 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP45Q70EL2 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.34■□□□□ 0.37
USP45Q70EL2 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
USP45Q70EL2 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USP45Q70EL2 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.34■□□□□ 0.37
USP45Q70EL2 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
USP45Q70EL2 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP45Q70EL2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USP45Q70EL2 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
USP45Q70EL2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.34■□□□□ 0.37
USP45Q70EL2 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
USP45Q70EL2 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.34■□□□□ 0.37
USP45Q70EL2 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
USP45Q70EL2 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.34■□□□□ 0.37
USP45Q70EL2 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.34■□□□□ 0.37
USP45Q70EL2 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP45Q70EL2 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USP45Q70EL2 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USP45Q70EL2 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
USP45Q70EL2 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
USP45Q70EL2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms