Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 AC079776.4-201ENST00000511039 504 ntBASIC19.72■□□□□ 0.75
LONRF3Q496Y0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LONRF3Q496Y0 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.72■□□□□ 0.75
LONRF3Q496Y0 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.72■□□□□ 0.75
LONRF3Q496Y0 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LONRF3Q496Y0 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.72■□□□□ 0.75
LONRF3Q496Y0 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LONRF3Q496Y0 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
LONRF3Q496Y0 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
LONRF3Q496Y0 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LONRF3Q496Y0 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
LONRF3Q496Y0 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
LONRF3Q496Y0 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LONRF3Q496Y0 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 AC096582.2-201ENST00000510860 516 ntBASIC19.71■□□□□ 0.75
LONRF3Q496Y0 AL160237.2-201ENST00000556165 472 ntBASIC19.71■□□□□ 0.75
LONRF3Q496Y0 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 AC109462.3-201ENST00000573934 613 ntBASIC19.71■□□□□ 0.75
LONRF3Q496Y0 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LONRF3Q496Y0 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.7■□□□□ 0.74
LONRF3Q496Y0 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LONRF3Q496Y0 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
LONRF3Q496Y0 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
LONRF3Q496Y0 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
LONRF3Q496Y0 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.7■□□□□ 0.74
LONRF3Q496Y0 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
LONRF3Q496Y0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LONRF3Q496Y0 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
LONRF3Q496Y0 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LONRF3Q496Y0 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
LONRF3Q496Y0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.7■□□□□ 0.74
LONRF3Q496Y0 BNIP3P18-201ENST00000593976 575 ntBASIC19.7■□□□□ 0.74
LONRF3Q496Y0 AL138831.2-201ENST00000606564 490 ntBASIC19.7■□□□□ 0.74
LONRF3Q496Y0 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
LONRF3Q496Y0 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.7■□□□□ 0.74
LONRF3Q496Y0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.7■□□□□ 0.74
LONRF3Q496Y0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LONRF3Q496Y0 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
LONRF3Q496Y0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LONRF3Q496Y0 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.7■□□□□ 0.74
LONRF3Q496Y0 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
LONRF3Q496Y0 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LONRF3Q496Y0 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.7■□□□□ 0.74
LONRF3Q496Y0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.69■□□□□ 0.74
LONRF3Q496Y0 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
LONRF3Q496Y0 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
LONRF3Q496Y0 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
LONRF3Q496Y0 AC124067.4-201ENST00000519691 2379 ntBASIC19.69■□□□□ 0.74
LONRF3Q496Y0 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LONRF3Q496Y0 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LONRF3Q496Y0 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LONRF3Q496Y0 MRPL3P1-201ENST00000400109 1033 ntBASIC19.69■□□□□ 0.74
LONRF3Q496Y0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.69■□□□□ 0.74
LONRF3Q496Y0 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.69■□□□□ 0.74
LONRF3Q496Y0 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
LONRF3Q496Y0 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.69■□□□□ 0.74
LONRF3Q496Y0 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.69■□□□□ 0.74
LONRF3Q496Y0 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
LONRF3Q496Y0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.69■□□□□ 0.74
LONRF3Q496Y0 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.69■□□□□ 0.74
LONRF3Q496Y0 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LONRF3Q496Y0 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LONRF3Q496Y0 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
LONRF3Q496Y0 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LONRF3Q496Y0 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.69■□□□□ 0.74
LONRF3Q496Y0 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms