Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.59■□□□□ 0.73
CCNA1P78396 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCNA1P78396 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.59■□□□□ 0.73
CCNA1P78396 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCNA1P78396 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCNA1P78396 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCNA1P78396 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCNA1P78396 HTR7P1-202ENST00000624664 4411 ntBASIC19.58■□□□□ 0.73
CCNA1P78396 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.58■□□□□ 0.73
CCNA1P78396 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCNA1P78396 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CCNA1P78396 PMS2P4-201ENST00000412466 1052 ntBASIC19.58■□□□□ 0.72
CCNA1P78396 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CCNA1P78396 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CCNA1P78396 AL512356.2-201ENST00000546955 174 ntBASIC19.58■□□□□ 0.72
CCNA1P78396 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.58■□□□□ 0.72
CCNA1P78396 AL135744.1-201ENST00000565098 629 ntBASIC19.58■□□□□ 0.72
CCNA1P78396 AC005412.3-201ENST00000580309 715 ntBASIC19.58■□□□□ 0.72
CCNA1P78396 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCNA1P78396 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCNA1P78396 AC239800.4-201ENST00000603712 296 ntBASIC19.58■□□□□ 0.72
CCNA1P78396 AJ011932.1-201ENST00000621707 465 ntBASIC19.58■□□□□ 0.72
CCNA1P78396 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCNA1P78396 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.58■□□□□ 0.72
CCNA1P78396 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCNA1P78396 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCNA1P78396 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCNA1P78396 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCNA1P78396 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CCNA1P78396 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCNA1P78396 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCNA1P78396 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCNA1P78396 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCNA1P78396 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CCNA1P78396 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.58■□□□□ 0.72
CCNA1P78396 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCNA1P78396 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CCNA1P78396 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCNA1P78396 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCNA1P78396 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.57■□□□□ 0.72
CCNA1P78396 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCNA1P78396 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
CCNA1P78396 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCNA1P78396 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCNA1P78396 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCNA1P78396 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.57■□□□□ 0.72
CCNA1P78396 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.57■□□□□ 0.72
CCNA1P78396 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCNA1P78396 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CCNA1P78396 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.57■□□□□ 0.72
CCNA1P78396 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCNA1P78396 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.57■□□□□ 0.72
CCNA1P78396 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.57■□□□□ 0.72
CCNA1P78396 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.57■□□□□ 0.72
CCNA1P78396 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.57■□□□□ 0.72
CCNA1P78396 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.57■□□□□ 0.72
CCNA1P78396 AC093214.1-201ENST00000511688 1107 ntBASIC19.57■□□□□ 0.72
CCNA1P78396 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.57■□□□□ 0.72
CCNA1P78396 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.57■□□□□ 0.72
CCNA1P78396 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.57■□□□□ 0.72
CCNA1P78396 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.57■□□□□ 0.72
CCNA1P78396 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCNA1P78396 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.57■□□□□ 0.72
CCNA1P78396 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCNA1P78396 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCNA1P78396 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCNA1P78396 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.57■□□□□ 0.72
CCNA1P78396 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCNA1P78396 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCNA1P78396 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCNA1P78396 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCNA1P78396 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCNA1P78396 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CCNA1P78396 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCNA1P78396 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCNA1P78396 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.56■□□□□ 0.72
CCNA1P78396 TNXA-203ENST00000507684 2038 ntBASIC19.56■□□□□ 0.72
CCNA1P78396 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCNA1P78396 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCNA1P78396 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCNA1P78396 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCNA1P78396 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
CCNA1P78396 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.56■□□□□ 0.72
CCNA1P78396 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCNA1P78396 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.56■□□□□ 0.72
CCNA1P78396 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.56■□□□□ 0.72
CCNA1P78396 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.56■□□□□ 0.72
CCNA1P78396 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCNA1P78396 DUX4L27-201ENST00000554796 1261 ntBASIC19.56■□□□□ 0.72
CCNA1P78396 AC243562.1-201ENST00000560672 389 ntBASIC19.56■□□□□ 0.72
CCNA1P78396 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.56■□□□□ 0.72
CCNA1P78396 AC138761.1-201ENST00000584393 385 ntBASIC19.56■□□□□ 0.72
CCNA1P78396 AP001059.3-201ENST00000619053 235 ntBASIC19.56■□□□□ 0.72
CCNA1P78396 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCNA1P78396 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCNA1P78396 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.56■□□□□ 0.72
CCNA1P78396 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCNA1P78396 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCNA1P78396 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.56■□□□□ 0.72
CCNA1P78396 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms