Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.15■□□□□ 0.02
HIST1H3AP68431 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H3AP68431 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H3AP68431 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
HIST1H3AP68431 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H3AP68431 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H3AP68431 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H3AP68431 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H3AP68431 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST1H3AP68431 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.15■□□□□ 0.02
HIST1H3AP68431 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.15■□□□□ 0.02
HIST1H3AP68431 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H3AP68431 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H3AP68431 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H3AP68431 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H3AP68431 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
HIST1H3AP68431 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H3AP68431 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H3AP68431 AD000864.1-201ENST00000624076 2295 ntBASIC15.14■□□□□ 0.01
HIST1H3AP68431 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
HIST1H3AP68431 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H3AP68431 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H3AP68431 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.14■□□□□ 0.01
HIST1H3AP68431 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H3AP68431 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
HIST1H3AP68431 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H3AP68431 NUS1P2-201ENST00000417358 873 ntBASIC15.14■□□□□ 0.01
HIST1H3AP68431 UPK3BP1-201ENST00000428678 509 ntBASIC15.14■□□□□ 0.01
HIST1H3AP68431 NUS1P1-201ENST00000446295 882 ntBASIC15.14■□□□□ 0.01
HIST1H3AP68431 SIGLEC30P-201ENST00000455569 941 ntBASIC15.14■□□□□ 0.01
HIST1H3AP68431 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.14■□□□□ 0.01
HIST1H3AP68431 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H3AP68431 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.14■□□□□ 0.01
HIST1H3AP68431 AL591684.3-201ENST00000605187 298 ntBASIC15.14■□□□□ 0.01
HIST1H3AP68431 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H3AP68431 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H3AP68431 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
HIST1H3AP68431 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
HIST1H3AP68431 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H3AP68431 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H3AP68431 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H3AP68431 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.14■□□□□ 0.01
HIST1H3AP68431 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H3AP68431 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.14■□□□□ 0.01
HIST1H3AP68431 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H3AP68431 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.14■□□□□ 0.01
HIST1H3AP68431 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H3AP68431 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H3AP68431 AC060834.1-201ENST00000443027 2032 ntBASIC15.14■□□□□ 0.01
HIST1H3AP68431 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST1H3AP68431 AC148477.5-201ENST00000625164 1645 ntBASIC15.14■□□□□ 0.01
HIST1H3AP68431 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
HIST1H3AP68431 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.13■□□□□ 0.01
HIST1H3AP68431 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HIST1H3AP68431 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST1H3AP68431 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST1H3AP68431 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST1H3AP68431 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HIST1H3AP68431 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
HIST1H3AP68431 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST1H3AP68431 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HIST1H3AP68431 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.13■□□□□ 0.01
HIST1H3AP68431 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
HIST1H3AP68431 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HIST1H3AP68431 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.13■□□□□ 0.01
HIST1H3AP68431 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST1H3AP68431 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST1H3AP68431 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
HIST1H3AP68431 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HIST1H3AP68431 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST1H3AP68431 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST1H3AP68431 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.13■□□□□ 0.01
HIST1H3AP68431 ACTG1P4-201ENST00000425123 1122 ntBASIC15.13■□□□□ 0.01
HIST1H3AP68431 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
HIST1H3AP68431 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HIST1H3AP68431 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HIST1H3AP68431 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
HIST1H3AP68431 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.13■□□□□ 0.01
HIST1H3AP68431 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
HIST1H3AP68431 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.13■□□□□ 0.01
HIST1H3AP68431 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.13■□□□□ 0.01
HIST1H3AP68431 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.13■□□□□ 0.01
HIST1H3AP68431 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.13■□□□□ 0.01
HIST1H3AP68431 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
HIST1H3AP68431 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST1H3AP68431 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST1H3AP68431 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
HIST1H3AP68431 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
HIST1H3AP68431 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HIST1H3AP68431 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.13■□□□□ 0.01
HIST1H3AP68431 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST1H3AP68431 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST1H3AP68431 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST1H3AP68431 AC079776.2-201ENST00000641154 1609 ntBASIC15.13■□□□□ 0.01
HIST1H3AP68431 AC012313.1-201ENST00000593393 3059 ntBASIC15.13■□□□□ 0.01
HIST1H3AP68431 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST1H3AP68431 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST1H3AP68431 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST1H3AP68431 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST1H3AP68431 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms