Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 SAPCD2P3-201ENST00000455031 850 ntBASIC19.86■□□□□ 0.77
KRT2P35908 FGFR3P6-201ENST00000457012 610 ntBASIC19.86■□□□□ 0.77
KRT2P35908 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
KRT2P35908 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.86■□□□□ 0.77
KRT2P35908 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.86■□□□□ 0.77
KRT2P35908 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.86■□□□□ 0.77
KRT2P35908 NKAPP1-205ENST00000585790 367 ntBASIC19.86■□□□□ 0.77
KRT2P35908 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.86■□□□□ 0.77
KRT2P35908 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
KRT2P35908 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT2P35908 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.86■□□□□ 0.77
KRT2P35908 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
KRT2P35908 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT2P35908 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT2P35908 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT2P35908 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KRT2P35908 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT2P35908 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT2P35908 EGFEM1P-202ENST00000431685 1563 ntBASIC19.86■□□□□ 0.77
KRT2P35908 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT2P35908 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.86■□□□□ 0.77
KRT2P35908 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
KRT2P35908 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KRT2P35908 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT2P35908 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KRT2P35908 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KRT2P35908 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT2P35908 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
KRT2P35908 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT2P35908 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT2P35908 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.85■□□□□ 0.77
KRT2P35908 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT2P35908 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT2P35908 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT2P35908 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT2P35908 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KRT2P35908 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT2P35908 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KRT2P35908 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT2P35908 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KRT2P35908 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
KRT2P35908 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
KRT2P35908 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.85■□□□□ 0.77
KRT2P35908 ACTG1P4-201ENST00000425123 1122 ntBASIC19.85■□□□□ 0.77
KRT2P35908 DUSP5P1-201ENST00000441325 1139 ntBASIC19.85■□□□□ 0.77
KRT2P35908 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.85■□□□□ 0.77
KRT2P35908 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KRT2P35908 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.85■□□□□ 0.77
KRT2P35908 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.85■□□□□ 0.77
KRT2P35908 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.85■□□□□ 0.77
KRT2P35908 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT2P35908 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.85■□□□□ 0.77
KRT2P35908 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT2P35908 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KRT2P35908 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT2P35908 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT2P35908 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT2P35908 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.85■□□□□ 0.77
KRT2P35908 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT2P35908 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT2P35908 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT2P35908 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT2P35908 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT2P35908 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.84■□□□□ 0.77
KRT2P35908 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
KRT2P35908 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.84■□□□□ 0.77
KRT2P35908 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.84■□□□□ 0.77
KRT2P35908 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KRT2P35908 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KRT2P35908 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KRT2P35908 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT2P35908 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT2P35908 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
KRT2P35908 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT2P35908 PRYP5-201ENST00000451909 266 ntBASIC19.84■□□□□ 0.77
KRT2P35908 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.84■□□□□ 0.77
KRT2P35908 UNC93B7-201ENST00000509439 705 ntBASIC19.84■□□□□ 0.77
KRT2P35908 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.84■□□□□ 0.77
KRT2P35908 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.84■□□□□ 0.77
KRT2P35908 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.84■□□□□ 0.77
KRT2P35908 AL022326.1-202ENST00000641533 845 ntBASIC19.84■□□□□ 0.77
KRT2P35908 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT2P35908 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
KRT2P35908 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KRT2P35908 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT2P35908 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KRT2P35908 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.84■□□□□ 0.77
KRT2P35908 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
KRT2P35908 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KRT2P35908 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.83■□□□□ 0.77
KRT2P35908 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
KRT2P35908 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KRT2P35908 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
KRT2P35908 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.83■□□□□ 0.77
KRT2P35908 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.83■□□□□ 0.77
KRT2P35908 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.83■□□□□ 0.77
KRT2P35908 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KRT2P35908 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KRT2P35908 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.83■□□□□ 0.77
KRT2P35908 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms