Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KRT9P35527 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT9P35527 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
KRT9P35527 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT9P35527 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT9P35527 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT9P35527 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.98■□□□□ 0.63
KRT9P35527 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT9P35527 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KRT9P35527 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT9P35527 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.98■□□□□ 0.63
KRT9P35527 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT9P35527 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KRT9P35527 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.98■□□□□ 0.63
KRT9P35527 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.98■□□□□ 0.63
KRT9P35527 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KRT9P35527 AC002558.1-201ENST00000488906 803 ntBASIC18.98■□□□□ 0.63
KRT9P35527 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.98■□□□□ 0.63
KRT9P35527 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.98■□□□□ 0.63
KRT9P35527 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT9P35527 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT9P35527 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.98■□□□□ 0.63
KRT9P35527 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT9P35527 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
KRT9P35527 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT9P35527 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
KRT9P35527 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT9P35527 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.98■□□□□ 0.63
KRT9P35527 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT9P35527 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KRT9P35527 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.97■□□□□ 0.63
KRT9P35527 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT9P35527 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT9P35527 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT9P35527 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT9P35527 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT9P35527 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KRT9P35527 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT9P35527 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.97■□□□□ 0.63
KRT9P35527 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT9P35527 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT9P35527 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT9P35527 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT9P35527 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.97■□□□□ 0.63
KRT9P35527 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT9P35527 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.97■□□□□ 0.63
KRT9P35527 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.97■□□□□ 0.63
KRT9P35527 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT9P35527 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KRT9P35527 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT9P35527 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT9P35527 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
KRT9P35527 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT9P35527 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KRT9P35527 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.96■□□□□ 0.63
KRT9P35527 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
KRT9P35527 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT9P35527 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
KRT9P35527 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.96■□□□□ 0.63
KRT9P35527 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
KRT9P35527 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT9P35527 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.96■□□□□ 0.63
KRT9P35527 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.96■□□□□ 0.63
KRT9P35527 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
KRT9P35527 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT9P35527 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.96■□□□□ 0.63
KRT9P35527 FAM86EP-206ENST00000510506 987 ntBASIC18.96■□□□□ 0.63
KRT9P35527 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
KRT9P35527 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.96■□□□□ 0.63
KRT9P35527 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
KRT9P35527 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT9P35527 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KRT9P35527 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
KRT9P35527 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KRT9P35527 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KRT9P35527 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT9P35527 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT9P35527 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT9P35527 AC005332.1-201ENST00000577698 1310 ntBASIC18.96■□□□□ 0.63
KRT9P35527 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT9P35527 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KRT9P35527 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT9P35527 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.95■□□□□ 0.62
KRT9P35527 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
KRT9P35527 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
KRT9P35527 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
KRT9P35527 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
KRT9P35527 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KRT9P35527 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KRT9P35527 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KRT9P35527 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT9P35527 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
KRT9P35527 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
KRT9P35527 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.95■□□□□ 0.62
KRT9P35527 AC010460.3-201ENST00000511359 1579 ntBASIC18.95■□□□□ 0.62
KRT9P35527 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.95■□□□□ 0.62
KRT9P35527 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KRT9P35527 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KRT9P35527 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.95■□□□□ 0.62
KRT9P35527 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms