Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CD40P25942 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD40P25942 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CD40P25942 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD40P25942 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.94□□□□□ -0.02
CD40P25942 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD40P25942 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.94□□□□□ -0.02
CD40P25942 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CD40P25942 AL590787.1-201ENST00000568856 1315 ntBASIC14.93□□□□□ -0.02
CD40P25942 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CD40P25942 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD40P25942 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD40P25942 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
CD40P25942 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CD40P25942 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.93□□□□□ -0.02
CD40P25942 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD40P25942 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD40P25942 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
CD40P25942 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD40P25942 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD40P25942 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
CD40P25942 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.93□□□□□ -0.02
CD40P25942 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD40P25942 MRPL20P1-201ENST00000400819 433 ntBASIC14.93□□□□□ -0.02
CD40P25942 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.93□□□□□ -0.02
CD40P25942 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.93□□□□□ -0.02
CD40P25942 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.93□□□□□ -0.02
CD40P25942 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.93□□□□□ -0.02
CD40P25942 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.93□□□□□ -0.02
CD40P25942 GPALPP1-207ENST00000611650 899 ntBASIC14.93□□□□□ -0.02
CD40P25942 AC006538.3-201ENST00000612495 578 ntBASIC14.93□□□□□ -0.02
CD40P25942 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.93□□□□□ -0.02
CD40P25942 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD40P25942 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CD40P25942 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.93□□□□□ -0.02
CD40P25942 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD40P25942 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD40P25942 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.93□□□□□ -0.02
CD40P25942 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD40P25942 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.93□□□□□ -0.02
CD40P25942 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD40P25942 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD40P25942 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.92□□□□□ -0.02
CD40P25942 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CD40P25942 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD40P25942 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD40P25942 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.92□□□□□ -0.02
CD40P25942 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.92□□□□□ -0.02
CD40P25942 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CD40P25942 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD40P25942 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD40P25942 PI4KAP1-204ENST00000612579 1703 ntBASIC14.92□□□□□ -0.02
CD40P25942 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CD40P25942 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.92□□□□□ -0.02
CD40P25942 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD40P25942 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CD40P25942 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.92□□□□□ -0.02
CD40P25942 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.92□□□□□ -0.02
CD40P25942 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.92□□□□□ -0.02
CD40P25942 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.92□□□□□ -0.02
CD40P25942 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.92□□□□□ -0.02
CD40P25942 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CD40P25942 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CD40P25942 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CD40P25942 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.92□□□□□ -0.02
CD40P25942 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD40P25942 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD40P25942 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CD40P25942 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CD40P25942 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD40P25942 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD40P25942 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CD40P25942 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.92□□□□□ -0.02
CD40P25942 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD40P25942 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC14.92□□□□□ -0.02
CD40P25942 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.92□□□□□ -0.02
CD40P25942 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC14.92□□□□□ -0.02
CD40P25942 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD40P25942 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
CD40P25942 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD40P25942 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD40P25942 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CD40P25942 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CD40P25942 GATB-213ENST00000515812 1893 ntTSL 5 BASIC14.91□□□□□ -0.02
CD40P25942 NFIC-211ENST00000641145 8399 ntBASIC14.91□□□□□ -0.02
CD40P25942 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC14.91□□□□□ -0.02
CD40P25942 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.91□□□□□ -0.02
CD40P25942 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CD40P25942 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.91□□□□□ -0.02
CD40P25942 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CD40P25942 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CD40P25942 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CD40P25942 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CD40P25942 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CD40P25942 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD40P25942 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.91□□□□□ -0.02
CD40P25942 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.91□□□□□ -0.02
CD40P25942 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.91□□□□□ -0.02
CD40P25942 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
CD40P25942 AC010654.1-201ENST00000615722 808 ntBASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms