Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CHGBP05060 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHGBP05060 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHGBP05060 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.78■□□□□ 0.92
CHGBP05060 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHGBP05060 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHGBP05060 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.77■□□□□ 0.92
CHGBP05060 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CHGBP05060 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.77■□□□□ 0.92
CHGBP05060 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CHGBP05060 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
CHGBP05060 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.77■□□□□ 0.92
CHGBP05060 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHGBP05060 RPS15P9-201ENST00000494093 319 ntBASIC20.77■□□□□ 0.92
CHGBP05060 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.77■□□□□ 0.92
CHGBP05060 AC006557.2-201ENST00000592985 1240 ntBASIC20.77■□□□□ 0.92
CHGBP05060 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.77■□□□□ 0.92
CHGBP05060 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHGBP05060 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.77■□□□□ 0.92
CHGBP05060 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHGBP05060 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CHGBP05060 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHGBP05060 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHGBP05060 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHGBP05060 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.77■□□□□ 0.92
CHGBP05060 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CHGBP05060 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CHGBP05060 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CHGBP05060 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHGBP05060 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.76■□□□□ 0.91
CHGBP05060 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
CHGBP05060 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHGBP05060 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.76■□□□□ 0.91
CHGBP05060 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CHGBP05060 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CHGBP05060 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.76■□□□□ 0.91
CHGBP05060 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.76■□□□□ 0.91
CHGBP05060 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.76■□□□□ 0.91
CHGBP05060 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.76■□□□□ 0.91
CHGBP05060 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.76■□□□□ 0.91
CHGBP05060 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.76■□□□□ 0.91
CHGBP05060 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.76■□□□□ 0.91
CHGBP05060 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.76■□□□□ 0.91
CHGBP05060 OR7E47P-204ENST00000575924 449 ntBASIC20.76■□□□□ 0.91
CHGBP05060 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.76■□□□□ 0.91
CHGBP05060 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHGBP05060 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CHGBP05060 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHGBP05060 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHGBP05060 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHGBP05060 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHGBP05060 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHGBP05060 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.76■□□□□ 0.91
CHGBP05060 AP001094.4-201ENST00000579008 2176 ntBASIC20.76■□□□□ 0.91
CHGBP05060 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHGBP05060 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHGBP05060 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHGBP05060 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHGBP05060 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHGBP05060 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHGBP05060 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHGBP05060 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.75■□□□□ 0.91
CHGBP05060 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CHGBP05060 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHGBP05060 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CHGBP05060 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.75■□□□□ 0.91
CHGBP05060 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHGBP05060 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHGBP05060 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHGBP05060 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHGBP05060 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.75■□□□□ 0.91
CHGBP05060 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.75■□□□□ 0.91
CHGBP05060 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.75■□□□□ 0.91
CHGBP05060 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CHGBP05060 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHGBP05060 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.75■□□□□ 0.91
CHGBP05060 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHGBP05060 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHGBP05060 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CHGBP05060 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CHGBP05060 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.75■□□□□ 0.91
CHGBP05060 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHGBP05060 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHGBP05060 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHGBP05060 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.74■□□□□ 0.91
CHGBP05060 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHGBP05060 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHGBP05060 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.74■□□□□ 0.91
CHGBP05060 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CHGBP05060 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHGBP05060 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CHGBP05060 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHGBP05060 RPS2P28-201ENST00000314255 741 ntBASIC20.74■□□□□ 0.91
CHGBP05060 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.74■□□□□ 0.91
CHGBP05060 AC060834.1-201ENST00000443027 2032 ntBASIC20.74■□□□□ 0.91
CHGBP05060 AC108073.2-201ENST00000464002 357 ntBASIC20.74■□□□□ 0.91
CHGBP05060 AC093909.1-201ENST00000504731 1122 ntBASIC20.74■□□□□ 0.91
CHGBP05060 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CHGBP05060 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.74■□□□□ 0.91
CHGBP05060 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms