Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 NEK4P2-201ENST00000580004 1012 ntBASIC14.59□□□□□ -0.07
CD74P04233 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.59□□□□□ -0.07
CD74P04233 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC14.59□□□□□ -0.07
CD74P04233 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CD74P04233 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CD74P04233 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD74P04233 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD74P04233 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD74P04233 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CD74P04233 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
CD74P04233 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD74P04233 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.59□□□□□ -0.07
CD74P04233 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD74P04233 EGFEM1P-202ENST00000431685 1563 ntBASIC14.59□□□□□ -0.07
CD74P04233 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
CD74P04233 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CD74P04233 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.59□□□□□ -0.07
CD74P04233 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD74P04233 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD74P04233 HLA-A-202ENST00000376806 1854 ntBASIC14.59□□□□□ -0.07
CD74P04233 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
CD74P04233 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD74P04233 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.59□□□□□ -0.07
CD74P04233 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.59□□□□□ -0.07
CD74P04233 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CD74P04233 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.07
CD74P04233 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CD74P04233 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.07
CD74P04233 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
CD74P04233 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.58□□□□□ -0.07
CD74P04233 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CD74P04233 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CD74P04233 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CD74P04233 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CD74P04233 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.58□□□□□ -0.08
CD74P04233 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.58□□□□□ -0.08
CD74P04233 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.58□□□□□ -0.08
CD74P04233 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.58□□□□□ -0.08
CD74P04233 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.58□□□□□ -0.08
CD74P04233 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD74P04233 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CD74P04233 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD74P04233 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CD74P04233 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CD74P04233 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CD74P04233 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CD74P04233 RPS2P55-201ENST00000397318 883 ntBASIC14.58□□□□□ -0.08
CD74P04233 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.58□□□□□ -0.08
CD74P04233 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CD74P04233 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.58□□□□□ -0.08
CD74P04233 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CD74P04233 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CD74P04233 AP001412.1-201ENST00000608405 714 ntBASIC14.58□□□□□ -0.08
CD74P04233 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CD74P04233 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CD74P04233 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CD74P04233 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD74P04233 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CD74P04233 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.58□□□□□ -0.08
CD74P04233 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
CD74P04233 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.58□□□□□ -0.08
CD74P04233 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.58□□□□□ -0.08
CD74P04233 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD74P04233 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CD74P04233 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.58□□□□□ -0.08
CD74P04233 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
CD74P04233 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CD74P04233 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.57□□□□□ -0.08
CD74P04233 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD74P04233 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD74P04233 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD74P04233 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD74P04233 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CD74P04233 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CD74P04233 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD74P04233 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.57□□□□□ -0.08
CD74P04233 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD74P04233 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CD74P04233 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CD74P04233 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD74P04233 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.57□□□□□ -0.08
CD74P04233 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD74P04233 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD74P04233 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD74P04233 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CD74P04233 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC14.57□□□□□ -0.08
CD74P04233 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD74P04233 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CD74P04233 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CD74P04233 AC107956.1-201ENST00000494359 873 ntBASIC14.57□□□□□ -0.08
CD74P04233 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.57□□□□□ -0.08
CD74P04233 PENK-204ENST00000518770 863 ntTSL 2 BASIC14.57□□□□□ -0.08
CD74P04233 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CD74P04233 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.57□□□□□ -0.08
CD74P04233 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.57□□□□□ -0.08
CD74P04233 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.57□□□□□ -0.08
CD74P04233 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.57□□□□□ -0.08
CD74P04233 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD74P04233 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD74P04233 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms