Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
IFNA1P01562 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
IFNA1P01562 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC13.76□□□□□ -0.21
IFNA1P01562 MIR3180-5-201ENST00000583743 153 ntBASIC13.76□□□□□ -0.21
IFNA1P01562 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IFNA1P01562 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IFNA1P01562 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
IFNA1P01562 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.76□□□□□ -0.21
IFNA1P01562 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IFNA1P01562 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
IFNA1P01562 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IFNA1P01562 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
IFNA1P01562 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
IFNA1P01562 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
IFNA1P01562 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.76□□□□□ -0.21
IFNA1P01562 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.76□□□□□ -0.21
IFNA1P01562 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IFNA1P01562 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
IFNA1P01562 AC009949.1-201ENST00000623048 1830 ntBASIC13.76□□□□□ -0.21
IFNA1P01562 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
IFNA1P01562 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
IFNA1P01562 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
IFNA1P01562 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IFNA1P01562 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
IFNA1P01562 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
IFNA1P01562 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
IFNA1P01562 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
IFNA1P01562 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
IFNA1P01562 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC13.75□□□□□ -0.21
IFNA1P01562 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.75□□□□□ -0.21
IFNA1P01562 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC13.75□□□□□ -0.21
IFNA1P01562 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
IFNA1P01562 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
IFNA1P01562 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
IFNA1P01562 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
IFNA1P01562 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
IFNA1P01562 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.75□□□□□ -0.21
IFNA1P01562 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
IFNA1P01562 KRT8P7-201ENST00000533003 1432 ntBASIC13.75□□□□□ -0.21
IFNA1P01562 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
IFNA1P01562 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
IFNA1P01562 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
IFNA1P01562 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
IFNA1P01562 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
IFNA1P01562 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
IFNA1P01562 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
IFNA1P01562 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC13.75□□□□□ -0.21
IFNA1P01562 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC13.75□□□□□ -0.21
IFNA1P01562 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
IFNA1P01562 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
IFNA1P01562 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.75□□□□□ -0.21
IFNA1P01562 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
IFNA1P01562 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC13.75□□□□□ -0.21
IFNA1P01562 MIPEPP3-201ENST00000412105 444 ntBASIC13.75□□□□□ -0.21
IFNA1P01562 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC13.75□□□□□ -0.21
IFNA1P01562 ZNRF2P3-201ENST00000424200 374 ntBASIC13.75□□□□□ -0.21
IFNA1P01562 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC13.75□□□□□ -0.21
IFNA1P01562 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC13.75□□□□□ -0.21
IFNA1P01562 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
IFNA1P01562 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC13.75□□□□□ -0.21
IFNA1P01562 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC13.75□□□□□ -0.21
IFNA1P01562 AC008687.5-201ENST00000593746 558 ntBASIC13.75□□□□□ -0.21
IFNA1P01562 AC008622.2-201ENST00000617006 1229 ntBASIC13.75□□□□□ -0.21
IFNA1P01562 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC13.75□□□□□ -0.21
IFNA1P01562 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
IFNA1P01562 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
IFNA1P01562 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
IFNA1P01562 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.75□□□□□ -0.21
IFNA1P01562 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
IFNA1P01562 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
IFNA1P01562 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
IFNA1P01562 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.75□□□□□ -0.21
IFNA1P01562 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
IFNA1P01562 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
IFNA1P01562 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
IFNA1P01562 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.75□□□□□ -0.21
IFNA1P01562 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
IFNA1P01562 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
IFNA1P01562 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
IFNA1P01562 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
IFNA1P01562 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
IFNA1P01562 AC078925.2-201ENST00000624013 1973 ntBASIC13.74□□□□□ -0.21
IFNA1P01562 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.74□□□□□ -0.21
IFNA1P01562 HOXB1-202ENST00000577092 1414 ntBASIC13.74□□□□□ -0.21
IFNA1P01562 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC13.74□□□□□ -0.21
IFNA1P01562 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC13.74□□□□□ -0.21
IFNA1P01562 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
IFNA1P01562 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
IFNA1P01562 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
IFNA1P01562 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC13.74□□□□□ -0.21
IFNA1P01562 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IFNA1P01562 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IFNA1P01562 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IFNA1P01562 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IFNA1P01562 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IFNA1P01562 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC13.74□□□□□ -0.21
IFNA1P01562 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC13.74□□□□□ -0.21
IFNA1P01562 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
IFNA1P01562 LYSMD4-203ENST00000378904 2122 ntBASIC13.74□□□□□ -0.21
IFNA1P01562 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms