Protein–RNA interactions for Protein: O95801

TTC4, Tetratricopeptide repeat protein 4, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC4O95801 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TTC4O95801 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC4O95801 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.81■□□□□ 0.44
TTC4O95801 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC4O95801 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TTC4O95801 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.81■□□□□ 0.44
TTC4O95801 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC4O95801 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.81■□□□□ 0.44
TTC4O95801 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC4O95801 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC4O95801 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
TTC4O95801 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC4O95801 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.81■□□□□ 0.44
TTC4O95801 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC4O95801 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
TTC4O95801 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC4O95801 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.81■□□□□ 0.44
TTC4O95801 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC4O95801 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC4O95801 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC4O95801 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.8■□□□□ 0.44
TTC4O95801 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TTC4O95801 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.8■□□□□ 0.44
TTC4O95801 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
TTC4O95801 RNF216P1-203ENST00000404404 2427 ntBASIC17.8■□□□□ 0.44
TTC4O95801 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC4O95801 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC4O95801 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC4O95801 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TTC4O95801 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.8■□□□□ 0.44
TTC4O95801 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TTC4O95801 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC4O95801 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.8■□□□□ 0.44
TTC4O95801 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC4O95801 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TTC4O95801 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC4O95801 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TTC4O95801 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TTC4O95801 AL359075.1-203ENST00000462729 1002 ntBASIC17.8■□□□□ 0.44
TTC4O95801 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.8■□□□□ 0.44
TTC4O95801 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.8■□□□□ 0.44
TTC4O95801 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
TTC4O95801 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.8■□□□□ 0.44
TTC4O95801 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.8■□□□□ 0.44
TTC4O95801 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC4O95801 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC4O95801 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC4O95801 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC4O95801 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.8■□□□□ 0.44
TTC4O95801 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.8■□□□□ 0.44
TTC4O95801 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.8■□□□□ 0.44
TTC4O95801 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC4O95801 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
TTC4O95801 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC4O95801 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TTC4O95801 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC4O95801 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TTC4O95801 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TTC4O95801 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.79■□□□□ 0.44
TTC4O95801 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TTC4O95801 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.79■□□□□ 0.44
TTC4O95801 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
TTC4O95801 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TTC4O95801 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TTC4O95801 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.79■□□□□ 0.44
TTC4O95801 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TTC4O95801 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TTC4O95801 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TTC4O95801 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TTC4O95801 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
TTC4O95801 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TTC4O95801 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.79■□□□□ 0.44
TTC4O95801 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.79■□□□□ 0.44
TTC4O95801 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TTC4O95801 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.79■□□□□ 0.44
TTC4O95801 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.79■□□□□ 0.44
TTC4O95801 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.79■□□□□ 0.44
TTC4O95801 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.79■□□□□ 0.44
TTC4O95801 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.79■□□□□ 0.44
TTC4O95801 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TTC4O95801 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.79■□□□□ 0.44
TTC4O95801 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.79■□□□□ 0.44
TTC4O95801 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TTC4O95801 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TTC4O95801 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TTC4O95801 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TTC4O95801 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TTC4O95801 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TTC4O95801 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TTC4O95801 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TTC4O95801 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TTC4O95801 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TTC4O95801 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.79■□□□□ 0.44
TTC4O95801 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
TTC4O95801 AC078925.2-201ENST00000624013 1973 ntBASIC17.79■□□□□ 0.44
TTC4O95801 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TTC4O95801 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.78■□□□□ 0.44
TTC4O95801 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TTC4O95801 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TTC4O95801 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms