Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1BO75841 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1BO75841 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
UPK1BO75841 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.11■□□□□ 0.01
UPK1BO75841 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1BO75841 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1BO75841 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC15.11■□□□□ 0.01
UPK1BO75841 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC15.11■□□□□ 0.01
UPK1BO75841 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1BO75841 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1BO75841 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
UPK1BO75841 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1BO75841 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1BO75841 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1BO75841 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1BO75841 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1BO75841 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1BO75841 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
UPK1BO75841 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.11■□□□□ 0.01
UPK1BO75841 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1BO75841 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
UPK1BO75841 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.11■□□□□ 0.01
UPK1BO75841 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1BO75841 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.11■□□□□ 0.01
UPK1BO75841 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1BO75841 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1BO75841 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC15.11■□□□□ 0.01
UPK1BO75841 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
UPK1BO75841 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1BO75841 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1BO75841 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.1■□□□□ 0.01
UPK1BO75841 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1BO75841 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1BO75841 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1BO75841 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1BO75841 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1BO75841 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1BO75841 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1BO75841 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1BO75841 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.1■□□□□ 0.01
UPK1BO75841 AC005104.2-201ENST00000427818 678 ntBASIC15.1■□□□□ 0.01
UPK1BO75841 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1BO75841 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC15.1■□□□□ 0.01
UPK1BO75841 AC011767.1-201ENST00000617410 1153 ntBASIC15.1■□□□□ 0.01
UPK1BO75841 AC231657.2-201ENST00000624556 255 ntBASIC15.1■□□□□ 0.01
UPK1BO75841 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.1■□□□□ 0.01
UPK1BO75841 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
UPK1BO75841 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.1■□□□□ 0.01
UPK1BO75841 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1BO75841 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC15.1■□□□□ 0.01
UPK1BO75841 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1BO75841 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.1■□□□□ 0.01
UPK1BO75841 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1BO75841 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK1BO75841 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.1■□□□□ 0.01
UPK1BO75841 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.1■□□□□ 0.01
UPK1BO75841 AL603832.2-201ENST00000566195 2125 ntBASIC15.1■□□□□ 0.01
UPK1BO75841 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.09■□□□□ 0.01
UPK1BO75841 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1BO75841 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
UPK1BO75841 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1BO75841 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1BO75841 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1BO75841 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
UPK1BO75841 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.09■□□□□ 0.01
UPK1BO75841 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1BO75841 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1BO75841 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1BO75841 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.09■□□□□ 0.01
UPK1BO75841 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1BO75841 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1BO75841 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1BO75841 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.09■□□□□ 0.01
UPK1BO75841 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
UPK1BO75841 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
UPK1BO75841 AC007322.1-201ENST00000426983 750 ntBASIC15.09■□□□□ 0.01
UPK1BO75841 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC15.09■□□□□ 0.01
UPK1BO75841 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC15.09■□□□□ 0.01
UPK1BO75841 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
UPK1BO75841 CKBP1-201ENST00000565489 1086 ntBASIC15.09■□□□□ 0.01
UPK1BO75841 AC142381.2-201ENST00000566120 298 ntBASIC15.09■□□□□ 0.01
UPK1BO75841 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1BO75841 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1BO75841 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1BO75841 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
UPK1BO75841 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1BO75841 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1BO75841 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.09■□□□□ 0.01
UPK1BO75841 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1BO75841 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
UPK1BO75841 SNX18-202ENST00000343017 3140 ntBASIC15.09■□□□□ 0.01
UPK1BO75841 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1BO75841 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1BO75841 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UPK1BO75841 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.09■□□□□ 0.01
UPK1BO75841 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.09■□□□□ 0.01
UPK1BO75841 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.09■□□□□ 0.01
UPK1BO75841 NFIC-211ENST00000641145 8399 ntBASIC15.09■□□□□ 0.01
UPK1BO75841 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
UPK1BO75841 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms