Protein–RNA interactions for Protein: O15020

SPTBN2, Spectrin beta chain, non-erythrocytic 2, humanhuman

Predictions only

Length 2,390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2O15020 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SPTBN2O15020 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPTBN2O15020 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SPTBN2O15020 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.35■□□□□ 0.21
SPTBN2O15020 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPTBN2O15020 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPTBN2O15020 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SPTBN2O15020 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPTBN2O15020 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SPTBN2O15020 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.35■□□□□ 0.21
SPTBN2O15020 IGHV3-62-201ENST00000520057 340 ntBASIC16.35■□□□□ 0.21
SPTBN2O15020 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.35■□□□□ 0.21
SPTBN2O15020 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.35■□□□□ 0.21
SPTBN2O15020 STK25P1-201ENST00000585406 838 ntBASIC16.35■□□□□ 0.21
SPTBN2O15020 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.35■□□□□ 0.21
SPTBN2O15020 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.35■□□□□ 0.21
SPTBN2O15020 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPTBN2O15020 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPTBN2O15020 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPTBN2O15020 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPTBN2O15020 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SPTBN2O15020 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPTBN2O15020 AL161938.1-201ENST00000569833 2180 ntBASIC16.35■□□□□ 0.21
SPTBN2O15020 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPTBN2O15020 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPTBN2O15020 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SPTBN2O15020 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPTBN2O15020 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPTBN2O15020 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPTBN2O15020 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPTBN2O15020 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPTBN2O15020 GNAQP1-201ENST00000444815 1067 ntBASIC16.35■□□□□ 0.21
SPTBN2O15020 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.35■□□□□ 0.21
SPTBN2O15020 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SPTBN2O15020 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.35■□□□□ 0.21
SPTBN2O15020 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.35■□□□□ 0.21
SPTBN2O15020 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPTBN2O15020 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPTBN2O15020 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.35■□□□□ 0.21
SPTBN2O15020 SPDYE12P-201ENST00000618416 771 ntBASIC16.35■□□□□ 0.21
SPTBN2O15020 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPTBN2O15020 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.34■□□□□ 0.21
SPTBN2O15020 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPTBN2O15020 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPTBN2O15020 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPTBN2O15020 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPTBN2O15020 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.34■□□□□ 0.21
SPTBN2O15020 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
SPTBN2O15020 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
SPTBN2O15020 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.34■□□□□ 0.21
SPTBN2O15020 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.34■□□□□ 0.21
SPTBN2O15020 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.34■□□□□ 0.21
SPTBN2O15020 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPTBN2O15020 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SPTBN2O15020 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.34■□□□□ 0.21
SPTBN2O15020 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPTBN2O15020 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPTBN2O15020 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.34■□□□□ 0.21
SPTBN2O15020 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.34■□□□□ 0.21
SPTBN2O15020 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.34■□□□□ 0.21
SPTBN2O15020 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SPTBN2O15020 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SPTBN2O15020 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SPTBN2O15020 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPTBN2O15020 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.34■□□□□ 0.21
SPTBN2O15020 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
SPTBN2O15020 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPTBN2O15020 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.34■□□□□ 0.21
SPTBN2O15020 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPTBN2O15020 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPTBN2O15020 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPTBN2O15020 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SPTBN2O15020 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SPTBN2O15020 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
SPTBN2O15020 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SPTBN2O15020 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPTBN2O15020 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
SPTBN2O15020 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPTBN2O15020 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.33■□□□□ 0.21
SPTBN2O15020 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
SPTBN2O15020 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SPTBN2O15020 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.21
SPTBN2O15020 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SPTBN2O15020 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SPTBN2O15020 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
SPTBN2O15020 GMCL1P1-201ENST00000463439 1581 ntBASIC16.33■□□□□ 0.21
SPTBN2O15020 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.33■□□□□ 0.2
SPTBN2O15020 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.33■□□□□ 0.2
SPTBN2O15020 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SPTBN2O15020 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPTBN2O15020 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SPTBN2O15020 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.33■□□□□ 0.2
SPTBN2O15020 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SPTBN2O15020 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.33■□□□□ 0.2
SPTBN2O15020 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SPTBN2O15020 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SPTBN2O15020 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SPTBN2O15020 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.33■□□□□ 0.2
SPTBN2O15020 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SPTBN2O15020 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms