Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLIC1O00299 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLIC1O00299 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CLIC1O00299 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CLIC1O00299 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.36■□□□□ 0.21
CLIC1O00299 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLIC1O00299 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLIC1O00299 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLIC1O00299 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.36■□□□□ 0.21
CLIC1O00299 AC122714.2-201ENST00000502787 707 ntBASIC16.36■□□□□ 0.21
CLIC1O00299 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLIC1O00299 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.36■□□□□ 0.21
CLIC1O00299 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.36■□□□□ 0.21
CLIC1O00299 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.36■□□□□ 0.21
CLIC1O00299 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.36■□□□□ 0.21
CLIC1O00299 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CLIC1O00299 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CLIC1O00299 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLIC1O00299 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.36■□□□□ 0.21
CLIC1O00299 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLIC1O00299 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.36■□□□□ 0.21
CLIC1O00299 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CLIC1O00299 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLIC1O00299 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
CLIC1O00299 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CLIC1O00299 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLIC1O00299 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.36■□□□□ 0.21
CLIC1O00299 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLIC1O00299 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.36■□□□□ 0.21
CLIC1O00299 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLIC1O00299 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CLIC1O00299 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.35■□□□□ 0.21
CLIC1O00299 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLIC1O00299 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.35■□□□□ 0.21
CLIC1O00299 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
CLIC1O00299 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLIC1O00299 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.35■□□□□ 0.21
CLIC1O00299 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLIC1O00299 AL049757.1-201ENST00000616842 1596 ntBASIC16.35■□□□□ 0.21
CLIC1O00299 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLIC1O00299 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLIC1O00299 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
CLIC1O00299 AC092068.3-201ENST00000587894 2016 ntBASIC16.35■□□□□ 0.21
CLIC1O00299 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CLIC1O00299 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLIC1O00299 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
CLIC1O00299 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CLIC1O00299 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLIC1O00299 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.35■□□□□ 0.21
CLIC1O00299 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
CLIC1O00299 AC103564.2-201ENST00000432853 1299 ntBASIC16.35■□□□□ 0.21
CLIC1O00299 RN7SL606P-201ENST00000472779 293 ntBASIC16.35■□□□□ 0.21
CLIC1O00299 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.35■□□□□ 0.21
CLIC1O00299 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLIC1O00299 AC124947.2-201ENST00000547118 1133 ntBASIC16.35■□□□□ 0.21
CLIC1O00299 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.35■□□□□ 0.21
CLIC1O00299 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.35■□□□□ 0.21
CLIC1O00299 AC111152.3-201ENST00000569699 673 ntBASIC16.35■□□□□ 0.21
CLIC1O00299 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLIC1O00299 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.35■□□□□ 0.21
CLIC1O00299 AC083849.1-201ENST00000615227 514 ntBASIC16.35■□□□□ 0.21
CLIC1O00299 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CLIC1O00299 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLIC1O00299 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLIC1O00299 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLIC1O00299 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.35■□□□□ 0.21
CLIC1O00299 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLIC1O00299 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CLIC1O00299 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CLIC1O00299 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.35■□□□□ 0.21
CLIC1O00299 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLIC1O00299 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CLIC1O00299 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.34■□□□□ 0.21
CLIC1O00299 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLIC1O00299 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLIC1O00299 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.34■□□□□ 0.21
CLIC1O00299 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.34■□□□□ 0.21
CLIC1O00299 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLIC1O00299 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CLIC1O00299 RNF216P1-203ENST00000404404 2427 ntBASIC16.34■□□□□ 0.21
CLIC1O00299 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLIC1O00299 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLIC1O00299 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLIC1O00299 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLIC1O00299 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLIC1O00299 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLIC1O00299 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLIC1O00299 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLIC1O00299 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLIC1O00299 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLIC1O00299 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.34■□□□□ 0.21
CLIC1O00299 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.34■□□□□ 0.21
CLIC1O00299 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.34■□□□□ 0.21
CLIC1O00299 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLIC1O00299 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.34■□□□□ 0.21
CLIC1O00299 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.34■□□□□ 0.21
CLIC1O00299 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CLIC1O00299 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CLIC1O00299 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLIC1O00299 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms