Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP25Q9UHP3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP25Q9UHP3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP25Q9UHP3 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
USP25Q9UHP3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
USP25Q9UHP3 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.92■□□□□ 0.78
USP25Q9UHP3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP25Q9UHP3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
USP25Q9UHP3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP25Q9UHP3 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP25Q9UHP3 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC19.92■□□□□ 0.78
USP25Q9UHP3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP25Q9UHP3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.92■□□□□ 0.78
USP25Q9UHP3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP25Q9UHP3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP25Q9UHP3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP25Q9UHP3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP25Q9UHP3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP25Q9UHP3 KRT18P57-201ENST00000443599 1254 ntBASIC19.92■□□□□ 0.78
USP25Q9UHP3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.92■□□□□ 0.78
USP25Q9UHP3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.92■□□□□ 0.78
USP25Q9UHP3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP25Q9UHP3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP25Q9UHP3 AL603756.1-201ENST00000606511 2163 ntBASIC19.92■□□□□ 0.78
USP25Q9UHP3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP25Q9UHP3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.92■□□□□ 0.78
USP25Q9UHP3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.92■□□□□ 0.78
USP25Q9UHP3 AC097374.2-201ENST00000618617 1306 ntBASIC19.92■□□□□ 0.78
USP25Q9UHP3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP25Q9UHP3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
USP25Q9UHP3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.92■□□□□ 0.78
USP25Q9UHP3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19.92■□□□□ 0.78
USP25Q9UHP3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP25Q9UHP3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP25Q9UHP3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
USP25Q9UHP3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
USP25Q9UHP3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
USP25Q9UHP3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP25Q9UHP3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP25Q9UHP3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
USP25Q9UHP3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP25Q9UHP3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP25Q9UHP3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
USP25Q9UHP3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.91■□□□□ 0.78
USP25Q9UHP3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP25Q9UHP3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.91■□□□□ 0.78
USP25Q9UHP3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP25Q9UHP3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP25Q9UHP3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.91■□□□□ 0.78
USP25Q9UHP3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP25Q9UHP3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.91■□□□□ 0.78
USP25Q9UHP3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP25Q9UHP3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP25Q9UHP3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.91■□□□□ 0.78
USP25Q9UHP3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP25Q9UHP3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.91■□□□□ 0.78
USP25Q9UHP3 AC092647.4-201ENST00000457211 535 ntBASIC19.91■□□□□ 0.78
USP25Q9UHP3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.91■□□□□ 0.78
USP25Q9UHP3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.91■□□□□ 0.78
USP25Q9UHP3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.91■□□□□ 0.78
USP25Q9UHP3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.91■□□□□ 0.78
USP25Q9UHP3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP25Q9UHP3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.91■□□□□ 0.78
USP25Q9UHP3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP25Q9UHP3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
USP25Q9UHP3 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.91■□□□□ 0.78
USP25Q9UHP3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP25Q9UHP3 AC016396.2-201ENST00000562575 1417 ntBASIC19.91■□□□□ 0.78
USP25Q9UHP3 LINC01311-201ENST00000565162 1445 ntBASIC19.91■□□□□ 0.78
USP25Q9UHP3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP25Q9UHP3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP25Q9UHP3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.91■□□□□ 0.78
USP25Q9UHP3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP25Q9UHP3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
USP25Q9UHP3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP25Q9UHP3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP25Q9UHP3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
USP25Q9UHP3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.91■□□□□ 0.78
USP25Q9UHP3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
USP25Q9UHP3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP25Q9UHP3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP25Q9UHP3 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP25Q9UHP3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
USP25Q9UHP3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.9■□□□□ 0.78
USP25Q9UHP3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.9■□□□□ 0.78
USP25Q9UHP3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP25Q9UHP3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
USP25Q9UHP3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP25Q9UHP3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP25Q9UHP3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
USP25Q9UHP3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP25Q9UHP3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
USP25Q9UHP3 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.9■□□□□ 0.78
USP25Q9UHP3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
USP25Q9UHP3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.9■□□□□ 0.78
USP25Q9UHP3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.9■□□□□ 0.78
USP25Q9UHP3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP25Q9UHP3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.9■□□□□ 0.78
USP25Q9UHP3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.9■□□□□ 0.78
USP25Q9UHP3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms