Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 TSPY26P-202ENST00000565928 3884 ntBASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 HLA-A-202ENST00000376806 1854 ntBASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 AL109923.1-201ENST00000618799 583 ntBASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.85□□□□□ -0.03
SMIM4Q8WVI0 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMIM4Q8WVI0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SMIM4Q8WVI0 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMIM4Q8WVI0 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMIM4Q8WVI0 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMIM4Q8WVI0 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMIM4Q8WVI0 AC002558.1-201ENST00000488906 803 ntBASIC14.84□□□□□ -0.03
SMIM4Q8WVI0 AC116562.2-201ENST00000507042 360 ntBASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms