Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
CCDC116Q8IYX3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC116Q8IYX3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC116Q8IYX3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC116Q8IYX3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC116Q8IYX3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CCDC116Q8IYX3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC116Q8IYX3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.38■□□□□ 0.21
CCDC116Q8IYX3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC116Q8IYX3 FOSL1P1-201ENST00000511041 816 ntBASIC16.38■□□□□ 0.21
CCDC116Q8IYX3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.38■□□□□ 0.21
CCDC116Q8IYX3 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC116Q8IYX3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.38■□□□□ 0.21
CCDC116Q8IYX3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.38■□□□□ 0.21
CCDC116Q8IYX3 MIR3652-201ENST00000579335 131 ntBASIC16.38■□□□□ 0.21
CCDC116Q8IYX3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC116Q8IYX3 AL591684.3-201ENST00000605187 298 ntBASIC16.38■□□□□ 0.21
CCDC116Q8IYX3 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.38■□□□□ 0.21
CCDC116Q8IYX3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.38■□□□□ 0.21
CCDC116Q8IYX3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC116Q8IYX3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC116Q8IYX3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
CCDC116Q8IYX3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CCDC116Q8IYX3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC116Q8IYX3 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC116Q8IYX3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CCDC116Q8IYX3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC116Q8IYX3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC116Q8IYX3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.37■□□□□ 0.21
CCDC116Q8IYX3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC116Q8IYX3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC116Q8IYX3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
CCDC116Q8IYX3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC116Q8IYX3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC116Q8IYX3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC116Q8IYX3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC116Q8IYX3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC116Q8IYX3 AC020916.1-201ENST00000587762 1774 ntBASIC16.37■□□□□ 0.21
CCDC116Q8IYX3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC116Q8IYX3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
CCDC116Q8IYX3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.37■□□□□ 0.21
CCDC116Q8IYX3 KRT16P4-201ENST00000453883 522 ntBASIC16.37■□□□□ 0.21
CCDC116Q8IYX3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.37■□□□□ 0.21
CCDC116Q8IYX3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.37■□□□□ 0.21
CCDC116Q8IYX3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC116Q8IYX3 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CCDC116Q8IYX3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC116Q8IYX3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.37■□□□□ 0.21
CCDC116Q8IYX3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.37■□□□□ 0.21
CCDC116Q8IYX3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.37■□□□□ 0.21
CCDC116Q8IYX3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC116Q8IYX3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CCDC116Q8IYX3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC116Q8IYX3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CCDC116Q8IYX3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.37■□□□□ 0.21
CCDC116Q8IYX3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC116Q8IYX3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.37■□□□□ 0.21
CCDC116Q8IYX3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC116Q8IYX3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC116Q8IYX3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC116Q8IYX3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC116Q8IYX3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CCDC116Q8IYX3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC116Q8IYX3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CCDC116Q8IYX3 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC116Q8IYX3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.36■□□□□ 0.21
CCDC116Q8IYX3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC116Q8IYX3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.36■□□□□ 0.21
CCDC116Q8IYX3 PMPCAP1-201ENST00000508114 1576 ntBASIC16.36■□□□□ 0.21
CCDC116Q8IYX3 AC009336.1-201ENST00000608941 1553 ntBASIC16.36■□□□□ 0.21
CCDC116Q8IYX3 AC003669.1-201ENST00000334569 611 ntBASIC16.36■□□□□ 0.21
CCDC116Q8IYX3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CCDC116Q8IYX3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.36■□□□□ 0.21
CCDC116Q8IYX3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.36■□□□□ 0.21
CCDC116Q8IYX3 KLF4P1-201ENST00000412782 1185 ntBASIC16.36■□□□□ 0.21
CCDC116Q8IYX3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.36■□□□□ 0.21
CCDC116Q8IYX3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.36■□□□□ 0.21
CCDC116Q8IYX3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CCDC116Q8IYX3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.36■□□□□ 0.21
CCDC116Q8IYX3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.36■□□□□ 0.21
CCDC116Q8IYX3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.36■□□□□ 0.21
CCDC116Q8IYX3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.36■□□□□ 0.21
CCDC116Q8IYX3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC116Q8IYX3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.36■□□□□ 0.21
CCDC116Q8IYX3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.36■□□□□ 0.21
CCDC116Q8IYX3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC116Q8IYX3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
CCDC116Q8IYX3 AC116353.5-201ENST00000638148 1699 ntBASIC16.36■□□□□ 0.21
CCDC116Q8IYX3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC116Q8IYX3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC116Q8IYX3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC116Q8IYX3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CCDC116Q8IYX3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC116Q8IYX3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC116Q8IYX3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CCDC116Q8IYX3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.35■□□□□ 0.21
CCDC116Q8IYX3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC116Q8IYX3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC116Q8IYX3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC116Q8IYX3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms