Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM50Q86XT4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM50Q86XT4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM50Q86XT4 AC002310.6-201ENST00000624451 1377 ntBASIC19.32■□□□□ 0.68
TRIM50Q86XT4 AC006116.8-202ENST00000587620 1550 ntBASIC19.32■□□□□ 0.68
TRIM50Q86XT4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM50Q86XT4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.32■□□□□ 0.68
TRIM50Q86XT4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TRIM50Q86XT4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM50Q86XT4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.32■□□□□ 0.68
TRIM50Q86XT4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.32■□□□□ 0.68
TRIM50Q86XT4 MCCD1P2-201ENST00000423228 335 ntBASIC19.32■□□□□ 0.68
TRIM50Q86XT4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.32■□□□□ 0.68
TRIM50Q86XT4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM50Q86XT4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TRIM50Q86XT4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.32■□□□□ 0.68
TRIM50Q86XT4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.32■□□□□ 0.68
TRIM50Q86XT4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.32■□□□□ 0.68
TRIM50Q86XT4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM50Q86XT4 AL139327.4-201ENST00000612362 153 ntBASIC19.32■□□□□ 0.68
TRIM50Q86XT4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM50Q86XT4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM50Q86XT4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.32■□□□□ 0.68
TRIM50Q86XT4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TRIM50Q86XT4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM50Q86XT4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM50Q86XT4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM50Q86XT4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM50Q86XT4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM50Q86XT4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.32■□□□□ 0.68
TRIM50Q86XT4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM50Q86XT4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM50Q86XT4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.31■□□□□ 0.68
TRIM50Q86XT4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM50Q86XT4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM50Q86XT4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.31■□□□□ 0.68
TRIM50Q86XT4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM50Q86XT4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM50Q86XT4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.31■□□□□ 0.68
TRIM50Q86XT4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM50Q86XT4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM50Q86XT4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM50Q86XT4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TRIM50Q86XT4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.31■□□□□ 0.68
TRIM50Q86XT4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM50Q86XT4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM50Q86XT4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TRIM50Q86XT4 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.31■□□□□ 0.68
TRIM50Q86XT4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.31■□□□□ 0.68
TRIM50Q86XT4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.31■□□□□ 0.68
TRIM50Q86XT4 AP001160.2-201ENST00000596071 487 ntBASIC19.31■□□□□ 0.68
TRIM50Q86XT4 AL078644.1-201ENST00000609881 752 ntBASIC19.31■□□□□ 0.68
TRIM50Q86XT4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TRIM50Q86XT4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM50Q86XT4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TRIM50Q86XT4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.31■□□□□ 0.68
TRIM50Q86XT4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM50Q86XT4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM50Q86XT4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TRIM50Q86XT4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.31■□□□□ 0.68
TRIM50Q86XT4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM50Q86XT4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM50Q86XT4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM50Q86XT4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM50Q86XT4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.3■□□□□ 0.68
TRIM50Q86XT4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
TRIM50Q86XT4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM50Q86XT4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM50Q86XT4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.3■□□□□ 0.68
TRIM50Q86XT4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM50Q86XT4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
TRIM50Q86XT4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM50Q86XT4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM50Q86XT4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM50Q86XT4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM50Q86XT4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM50Q86XT4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TRIM50Q86XT4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TRIM50Q86XT4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.3■□□□□ 0.68
TRIM50Q86XT4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM50Q86XT4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.3■□□□□ 0.68
TRIM50Q86XT4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.3■□□□□ 0.68
TRIM50Q86XT4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.3■□□□□ 0.68
TRIM50Q86XT4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM50Q86XT4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM50Q86XT4 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.3■□□□□ 0.68
TRIM50Q86XT4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM50Q86XT4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.3■□□□□ 0.68
TRIM50Q86XT4 AL355312.1-201ENST00000407115 2176 ntBASIC19.3■□□□□ 0.68
TRIM50Q86XT4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.3■□□□□ 0.68
TRIM50Q86XT4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM50Q86XT4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM50Q86XT4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.3■□□□□ 0.68
TRIM50Q86XT4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.3■□□□□ 0.68
TRIM50Q86XT4 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
TRIM50Q86XT4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM50Q86XT4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM50Q86XT4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM50Q86XT4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
TRIM50Q86XT4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms