Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP46P62068 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.25■□□□□ 0.51
USP46P62068 LINC01451-201ENST00000623792 534 ntBASIC18.25■□□□□ 0.51
USP46P62068 AC005593.1-201ENST00000624894 515 ntBASIC18.25■□□□□ 0.51
USP46P62068 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP46P62068 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP46P62068 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.25■□□□□ 0.51
USP46P62068 AC046185.3-201ENST00000623228 1824 ntBASIC18.25■□□□□ 0.51
USP46P62068 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP46P62068 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.25■□□□□ 0.51
USP46P62068 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
USP46P62068 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP46P62068 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP46P62068 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP46P62068 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP46P62068 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP46P62068 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
USP46P62068 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
USP46P62068 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USP46P62068 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP46P62068 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
USP46P62068 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP46P62068 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP46P62068 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USP46P62068 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
USP46P62068 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP46P62068 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.24■□□□□ 0.51
USP46P62068 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.24■□□□□ 0.51
USP46P62068 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USP46P62068 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
USP46P62068 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.24■□□□□ 0.51
USP46P62068 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.24■□□□□ 0.51
USP46P62068 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.24■□□□□ 0.51
USP46P62068 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.24■□□□□ 0.51
USP46P62068 TERC-201ENST00000602385 541 ntBASIC18.24■□□□□ 0.51
USP46P62068 AL353135.1-201ENST00000606729 504 ntBASIC18.24■□□□□ 0.51
USP46P62068 AC027601.4-201ENST00000611259 610 ntBASIC18.24■□□□□ 0.51
USP46P62068 AL139327.4-201ENST00000612362 153 ntBASIC18.24■□□□□ 0.51
USP46P62068 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
USP46P62068 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP46P62068 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
USP46P62068 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.24■□□□□ 0.51
USP46P62068 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.24■□□□□ 0.51
USP46P62068 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP46P62068 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP46P62068 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.23■□□□□ 0.51
USP46P62068 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP46P62068 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
USP46P62068 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP46P62068 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP46P62068 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP46P62068 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.23■□□□□ 0.51
USP46P62068 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.23■□□□□ 0.51
USP46P62068 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.23■□□□□ 0.51
USP46P62068 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP46P62068 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP46P62068 AL135999.2-201ENST00000622438 1686 ntBASIC18.23■□□□□ 0.51
USP46P62068 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.23■□□□□ 0.51
USP46P62068 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
USP46P62068 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP46P62068 MED15P5-201ENST00000423150 992 ntBASIC18.23■□□□□ 0.51
USP46P62068 AC007967.2-201ENST00000432613 625 ntBASIC18.23■□□□□ 0.51
USP46P62068 AC108751.1-201ENST00000490852 363 ntBASIC18.23■□□□□ 0.51
USP46P62068 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP46P62068 PGAM5P1-201ENST00000518923 814 ntBASIC18.23■□□□□ 0.51
USP46P62068 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.23■□□□□ 0.51
USP46P62068 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
USP46P62068 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP46P62068 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
USP46P62068 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.23■□□□□ 0.51
USP46P62068 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
USP46P62068 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
USP46P62068 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.23■□□□□ 0.51
USP46P62068 AC068880.1-201ENST00000507289 2297 ntBASIC18.23■□□□□ 0.51
USP46P62068 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.23■□□□□ 0.51
USP46P62068 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.22■□□□□ 0.51
USP46P62068 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP46P62068 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
USP46P62068 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
USP46P62068 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
USP46P62068 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP46P62068 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.22■□□□□ 0.51
USP46P62068 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
USP46P62068 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP46P62068 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP46P62068 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP46P62068 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.22■□□□□ 0.51
USP46P62068 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.22■□□□□ 0.51
USP46P62068 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.22■□□□□ 0.51
USP46P62068 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.22■□□□□ 0.51
USP46P62068 RPS15P9-201ENST00000494093 319 ntBASIC18.22■□□□□ 0.51
USP46P62068 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.22■□□□□ 0.51
USP46P62068 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.22■□□□□ 0.51
USP46P62068 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP46P62068 PGM5P2-202ENST00000637225 1043 ntBASIC18.22■□□□□ 0.51
USP46P62068 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP46P62068 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.22■□□□□ 0.51
USP46P62068 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
USP46P62068 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
USP46P62068 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms